Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03425 and BWI76_RS03430 overlap by 7 nucleotides BWI76_RS03430 and BWI76_RS03435 are separated by 23 nucleotides BWI76_RS03435 and BWI76_RS03440 are separated by 52 nucleotides
BWI76_RS03425: BWI76_RS03425 - dihydrodipicolinate synthase family protein, at 704,635 to 705,546
_RS03425
BWI76_RS03430: BWI76_RS03430 - short-chain dehydrogenase, at 705,540 to 706,367
_RS03430
BWI76_RS03435: BWI76_RS03435 - mandelate racemase/muconate lactonizing protein, at 706,391 to 707,494
_RS03435
BWI76_RS03440: BWI76_RS03440 - MFS transporter, at 707,547 to 708,998
_RS03440
Position (kb) 706
707
708 Strain fitness (log2 ratio) -1
0
1
2 at 705.420 kb on - strand, within BWI76_RS03425 at 705.662 kb on + strand, within BWI76_RS03430 at 705.698 kb on + strand, within BWI76_RS03430 at 706.000 kb on - strand, within BWI76_RS03430 at 706.062 kb on + strand, within BWI76_RS03430 at 706.065 kb on - strand, within BWI76_RS03430 at 706.128 kb on + strand, within BWI76_RS03430 at 706.187 kb on - strand, within BWI76_RS03430 at 706.280 kb on - strand, within BWI76_RS03430 at 706.290 kb on - strand at 706.305 kb on - strand at 706.667 kb on + strand, within BWI76_RS03435 at 706.714 kb on + strand, within BWI76_RS03435 at 706.740 kb on + strand, within BWI76_RS03435 at 707.059 kb on + strand, within BWI76_RS03435 at 707.165 kb on - strand, within BWI76_RS03435 at 707.277 kb on - strand, within BWI76_RS03435 at 707.409 kb on + strand at 707.432 kb on - strand at 707.537 kb on - strand at 707.738 kb on + strand, within BWI76_RS03440 at 707.746 kb on - strand, within BWI76_RS03440 at 707.756 kb on - strand, within BWI76_RS03440 at 707.917 kb on - strand, within BWI76_RS03440 at 707.922 kb on + strand, within BWI76_RS03440 at 708.190 kb on - strand, within BWI76_RS03440 at 708.287 kb on - strand, within BWI76_RS03440 at 708.304 kb on + strand, within BWI76_RS03440
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL remove 705,420 - BWI76_RS03425 0.86 +0.5 705,662 + BWI76_RS03430 0.15 +0.6 705,698 + BWI76_RS03430 0.19 +0.2 706,000 - BWI76_RS03430 0.56 +0.7 706,062 + BWI76_RS03430 0.63 +0.5 706,065 - BWI76_RS03430 0.63 +0.5 706,128 + BWI76_RS03430 0.71 -1.1 706,187 - BWI76_RS03430 0.78 -0.9 706,280 - BWI76_RS03430 0.89 -0.8 706,290 - -1.4 706,305 - -1.1 706,667 + BWI76_RS03435 0.25 -0.5 706,714 + BWI76_RS03435 0.29 -0.3 706,740 + BWI76_RS03435 0.32 -0.3 707,059 + BWI76_RS03435 0.61 -0.8 707,165 - BWI76_RS03435 0.70 -1.2 707,277 - BWI76_RS03435 0.80 -0.1 707,409 + +0.4 707,432 - -0.8 707,537 - +0.9 707,738 + BWI76_RS03440 0.13 -0.1 707,746 - BWI76_RS03440 0.14 -0.8 707,756 - BWI76_RS03440 0.14 -0.4 707,917 - BWI76_RS03440 0.25 +0.1 707,922 + BWI76_RS03440 0.26 +0.1 708,190 - BWI76_RS03440 0.44 +0.3 708,287 - BWI76_RS03440 0.51 +2.2 708,304 + BWI76_RS03440 0.52 +0.3
Or see this region's nucleotide sequence