Experiment: Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02995 and BWI76_RS03000 are separated by 36 nucleotides BWI76_RS03000 and BWI76_RS03005 are separated by 192 nucleotides BWI76_RS03005 and BWI76_RS03010 are separated by 190 nucleotides BWI76_RS03010 and BWI76_RS03015 are separated by 164 nucleotides BWI76_RS03015 and BWI76_RS03020 are separated by 52 nucleotides
BWI76_RS02995: BWI76_RS02995 - aspartate carbamoyltransferase, at 613,986 to 614,921
_RS02995
BWI76_RS03000: BWI76_RS03000 - PyrBI operon leader peptide, at 614,958 to 615,062
_RS03000
BWI76_RS03005: BWI76_RS03005 - hypothetical protein, at 615,255 to 615,707
_RS03005
BWI76_RS03010: BWI76_RS03010 - ornithine carbamoyltransferase, at 615,898 to 616,902
_RS03010
BWI76_RS03015: BWI76_RS03015 - RNase E inhibitor protein, at 617,067 to 617,492
_RS03015
BWI76_RS03020: BWI76_RS03020 - tRNA hydroxylase, at 617,545 to 618,303
_RS03020
Position (kb) 615
616
617 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 614.919 kb on - strand at 615.106 kb on - strand at 615.140 kb on - strand at 615.140 kb on - strand at 615.279 kb on + strand at 615.300 kb on + strand at 615.323 kb on + strand, within BWI76_RS03005 at 615.331 kb on - strand, within BWI76_RS03005 at 615.331 kb on - strand, within BWI76_RS03005 at 615.356 kb on + strand, within BWI76_RS03005 at 615.617 kb on + strand, within BWI76_RS03005 at 615.682 kb on - strand at 615.739 kb on - strand at 615.800 kb on - strand at 615.823 kb on + strand at 615.829 kb on - strand at 615.858 kb on + strand at 616.124 kb on - strand, within BWI76_RS03010 at 616.214 kb on - strand, within BWI76_RS03010 at 616.216 kb on + strand, within BWI76_RS03010 at 616.224 kb on - strand, within BWI76_RS03010 at 616.361 kb on - strand, within BWI76_RS03010 at 616.361 kb on - strand, within BWI76_RS03010 at 616.388 kb on + strand, within BWI76_RS03010 at 616.423 kb on + strand, within BWI76_RS03010 at 616.431 kb on - strand, within BWI76_RS03010 at 616.480 kb on - strand, within BWI76_RS03010 at 616.480 kb on - strand, within BWI76_RS03010 at 616.489 kb on + strand, within BWI76_RS03010 at 616.507 kb on - strand, within BWI76_RS03010 at 616.530 kb on + strand, within BWI76_RS03010 at 616.695 kb on + strand, within BWI76_RS03010 at 616.808 kb on + strand at 616.808 kb on + strand at 616.808 kb on + strand at 616.808 kb on + strand at 616.808 kb on + strand at 616.816 kb on - strand at 616.844 kb on - strand at 616.906 kb on - strand at 617.167 kb on - strand, within BWI76_RS03015 at 617.323 kb on + strand, within BWI76_RS03015 at 617.607 kb on - strand at 617.654 kb on - strand, within BWI76_RS03020 at 617.665 kb on - strand, within BWI76_RS03020 at 617.665 kb on - strand, within BWI76_RS03020 at 617.761 kb on - strand, within BWI76_RS03020
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL remove 614,919 - -2.3 615,106 - -0.0 615,140 - -2.0 615,140 - -0.6 615,279 + +0.6 615,300 + +0.2 615,323 + BWI76_RS03005 0.15 +0.3 615,331 - BWI76_RS03005 0.17 -0.7 615,331 - BWI76_RS03005 0.17 +0.5 615,356 + BWI76_RS03005 0.22 +0.6 615,617 + BWI76_RS03005 0.80 +1.7 615,682 - -0.4 615,739 - -0.4 615,800 - -0.3 615,823 + +0.7 615,829 - -0.8 615,858 + -0.1 616,124 - BWI76_RS03010 0.22 -2.2 616,214 - BWI76_RS03010 0.31 -2.9 616,216 + BWI76_RS03010 0.32 -1.0 616,224 - BWI76_RS03010 0.32 -0.8 616,361 - BWI76_RS03010 0.46 -2.1 616,361 - BWI76_RS03010 0.46 -1.3 616,388 + BWI76_RS03010 0.49 -5.6 616,423 + BWI76_RS03010 0.52 -4.6 616,431 - BWI76_RS03010 0.53 -2.7 616,480 - BWI76_RS03010 0.58 -4.3 616,480 - BWI76_RS03010 0.58 -2.6 616,489 + BWI76_RS03010 0.59 -4.6 616,507 - BWI76_RS03010 0.61 -4.3 616,530 + BWI76_RS03010 0.63 -4.1 616,695 + BWI76_RS03010 0.79 -4.1 616,808 + -2.6 616,808 + -5.7 616,808 + -2.5 616,808 + -3.4 616,808 + -4.2 616,816 - -4.4 616,844 - -2.2 616,906 - -2.6 617,167 - BWI76_RS03015 0.23 -0.1 617,323 + BWI76_RS03015 0.60 -1.4 617,607 - -0.3 617,654 - BWI76_RS03020 0.14 -0.1 617,665 - BWI76_RS03020 0.16 -1.6 617,665 - BWI76_RS03020 0.16 -0.2 617,761 - BWI76_RS03020 0.28 +2.1
Or see this region's nucleotide sequence