Experiment: Carbon source D-Glucose 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_09295 and AO356_09300 are separated by 203 nucleotides AO356_09300 and AO356_09305 overlap by 1 nucleotides
AO356_09295: AO356_09295 - hypothetical protein, at 2,103,077 to 2,104,354
_09295
AO356_09300: AO356_09300 - type II secretory protein PulM, at 2,104,558 to 2,105,013
_09300
AO356_09305: AO356_09305 - type II secretory protein pull, at 2,105,013 to 2,106,116
_09305
Position (kb)
2104
2105
2106 Strain fitness (log2 ratio)
-2
-1
0
1 at 2103.574 kb on + strand, within AO356_09295 at 2103.575 kb on + strand, within AO356_09295 at 2103.575 kb on + strand, within AO356_09295 at 2103.575 kb on + strand, within AO356_09295 at 2103.575 kb on + strand, within AO356_09295 at 2103.575 kb on + strand, within AO356_09295 at 2103.575 kb on + strand, within AO356_09295 at 2103.575 kb on + strand, within AO356_09295 at 2103.575 kb on + strand, within AO356_09295 at 2103.576 kb on - strand, within AO356_09295 at 2103.576 kb on - strand, within AO356_09295 at 2103.576 kb on - strand, within AO356_09295 at 2103.576 kb on - strand, within AO356_09295 at 2103.576 kb on - strand, within AO356_09295 at 2103.576 kb on - strand, within AO356_09295 at 2103.577 kb on + strand, within AO356_09295 at 2103.578 kb on - strand, within AO356_09295 at 2103.860 kb on + strand, within AO356_09295 at 2103.860 kb on + strand, within AO356_09295 at 2103.860 kb on + strand, within AO356_09295 at 2103.861 kb on - strand, within AO356_09295 at 2103.861 kb on - strand, within AO356_09295 at 2103.890 kb on + strand, within AO356_09295 at 2103.891 kb on - strand, within AO356_09295 at 2103.932 kb on + strand, within AO356_09295 at 2103.933 kb on - strand, within AO356_09295 at 2103.933 kb on - strand, within AO356_09295 at 2103.933 kb on - strand, within AO356_09295 at 2103.933 kb on - strand, within AO356_09295 at 2103.947 kb on + strand, within AO356_09295 at 2103.947 kb on + strand, within AO356_09295 at 2103.947 kb on + strand, within AO356_09295 at 2103.947 kb on + strand, within AO356_09295 at 2103.947 kb on + strand, within AO356_09295 at 2103.947 kb on + strand, within AO356_09295 at 2103.948 kb on - strand, within AO356_09295 at 2103.948 kb on - strand, within AO356_09295 at 2103.948 kb on - strand, within AO356_09295 at 2103.948 kb on - strand, within AO356_09295 at 2103.948 kb on - strand, within AO356_09295 at 2103.948 kb on - strand, within AO356_09295 at 2103.948 kb on - strand, within AO356_09295 at 2103.948 kb on - strand, within AO356_09295 at 2104.178 kb on + strand, within AO356_09295 at 2104.178 kb on + strand, within AO356_09295 at 2104.179 kb on - strand, within AO356_09295 at 2104.179 kb on - strand, within AO356_09295 at 2104.190 kb on + strand, within AO356_09295 at 2104.191 kb on - strand, within AO356_09295 at 2104.194 kb on - strand, within AO356_09295 at 2104.194 kb on - strand, within AO356_09295 at 2104.352 kb on + strand at 2104.352 kb on + strand at 2104.352 kb on + strand at 2104.461 kb on - strand at 2104.461 kb on - strand at 2104.905 kb on - strand, within AO356_09300 at 2105.362 kb on + strand, within AO356_09305 at 2105.394 kb on + strand, within AO356_09305 at 2105.394 kb on + strand, within AO356_09305 at 2105.394 kb on + strand, within AO356_09305 at 2105.395 kb on - strand, within AO356_09305 at 2105.395 kb on - strand, within AO356_09305
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Glucose 10 mM remove 2,103,574 + AO356_09295 0.39 +0.2 2,103,575 + AO356_09295 0.39 -1.0 2,103,575 + AO356_09295 0.39 -0.2 2,103,575 + AO356_09295 0.39 +0.2 2,103,575 + AO356_09295 0.39 -0.3 2,103,575 + AO356_09295 0.39 +0.4 2,103,575 + AO356_09295 0.39 +0.5 2,103,575 + AO356_09295 0.39 +0.7 2,103,575 + AO356_09295 0.39 -1.2 2,103,576 - AO356_09295 0.39 -0.1 2,103,576 - AO356_09295 0.39 -1.3 2,103,576 - AO356_09295 0.39 +0.0 2,103,576 - AO356_09295 0.39 -0.1 2,103,576 - AO356_09295 0.39 +0.6 2,103,576 - AO356_09295 0.39 +0.6 2,103,577 + AO356_09295 0.39 +1.2 2,103,578 - AO356_09295 0.39 +1.0 2,103,860 + AO356_09295 0.61 -0.7 2,103,860 + AO356_09295 0.61 -1.4 2,103,860 + AO356_09295 0.61 -0.3 2,103,861 - AO356_09295 0.61 -0.3 2,103,861 - AO356_09295 0.61 +0.1 2,103,890 + AO356_09295 0.64 +0.2 2,103,891 - AO356_09295 0.64 +0.7 2,103,932 + AO356_09295 0.67 +0.6 2,103,933 - AO356_09295 0.67 -0.4 2,103,933 - AO356_09295 0.67 +0.4 2,103,933 - AO356_09295 0.67 -0.4 2,103,933 - AO356_09295 0.67 -0.3 2,103,947 + AO356_09295 0.68 +1.6 2,103,947 + AO356_09295 0.68 +0.1 2,103,947 + AO356_09295 0.68 -0.4 2,103,947 + AO356_09295 0.68 +0.7 2,103,947 + AO356_09295 0.68 +0.3 2,103,947 + AO356_09295 0.68 +0.1 2,103,948 - AO356_09295 0.68 -0.1 2,103,948 - AO356_09295 0.68 +0.7 2,103,948 - AO356_09295 0.68 +0.7 2,103,948 - AO356_09295 0.68 -0.9 2,103,948 - AO356_09295 0.68 +0.6 2,103,948 - AO356_09295 0.68 +0.3 2,103,948 - AO356_09295 0.68 +1.0 2,103,948 - AO356_09295 0.68 +0.1 2,104,178 + AO356_09295 0.86 -0.1 2,104,178 + AO356_09295 0.86 +0.6 2,104,179 - AO356_09295 0.86 -1.0 2,104,179 - AO356_09295 0.86 -0.1 2,104,190 + AO356_09295 0.87 -1.5 2,104,191 - AO356_09295 0.87 +0.5 2,104,194 - AO356_09295 0.87 -0.2 2,104,194 - AO356_09295 0.87 -0.1 2,104,352 + +1.0 2,104,352 + +0.6 2,104,352 + -1.8 2,104,461 - +0.4 2,104,461 - -0.7 2,104,905 - AO356_09300 0.76 -1.3 2,105,362 + AO356_09305 0.32 +0.4 2,105,394 + AO356_09305 0.35 -0.4 2,105,394 + AO356_09305 0.35 +0.3 2,105,394 + AO356_09305 0.35 -2.0 2,105,395 - AO356_09305 0.35 +1.2 2,105,395 - AO356_09305 0.35 +0.3
Or see this region's nucleotide sequence