Strain Fitness in Shewanella oneidensis MR-1 around SO1957

Experiment: hydrous ferric oxide electron acceptor; flight

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	hydrous ferric oxide electron acceptor; flight
2,062,282	+		SO1955	0.72	+0.6
2,062,287	+		SO1955	0.74	+0.0
2,062,287	+		SO1955	0.74	+1.3
2,062,295	-		SO1955	0.75	+1.2
2,062,295	-		SO1955	0.75	-1.4
2,062,295	-		SO1955	0.75	-3.0
2,062,305	+		SO1955	0.77	+0.1
2,062,312	-		SO1955	0.79	+1.2
2,062,348	+		SO1955	0.87	-0.6
2,062,348	-		SO1955	0.87	+1.3
2,062,349	+		SO1955	0.87	+0.6
2,062,356	-		SO1955	0.89	+0.5
2,062,366	+				+0.1
2,062,366	+				-1.0
2,062,366	+				+0.4
2,062,369	-				-0.1
2,062,374	-				-2.2
2,062,374	-				-3.6
2,062,374	-				+0.1
2,062,374	-				-0.5
2,062,374	-				+0.9
2,062,374	-				-0.1
2,062,374	-				+1.0
2,062,385	+				+0.8
2,062,450	+				+0.3
2,062,450	+				+1.0
2,062,450	+				+2.0
2,062,450	+				+1.4
2,062,450	+				+0.3
2,062,450	+				+1.0
2,062,450	+				+0.5
2,062,450	+				-0.4
2,062,450	+				-1.8
2,062,458	-				-1.8
2,062,458	-				-0.1
2,062,458	-				-3.6
2,062,458	-				+0.7
2,062,458	-				+0.5
2,062,464	+				+0.3
2,062,466	+				+0.6
2,062,466	+				+2.0
2,062,466	+				-1.8
2,062,490	+				+0.4
2,062,518	-				+0.4
2,062,577	+				-0.0
2,062,588	+				-2.7
2,062,588	+				+0.2
2,062,592	+				-2.5
2,062,602	-				+0.9
2,062,608	+				+0.6
2,062,614	+				+0.5
2,062,615	+				+1.4
2,062,615	+				-3.3
2,062,615	+				+0.4
2,062,615	+				+1.4
2,062,615	+				-3.0
2,062,615	+				-3.1
2,062,615	+				+0.5
2,062,615	+				+0.4
2,062,615	+				+1.5
2,062,615	+				-0.6
2,062,615	+				+0.3
2,062,615	+				-0.6
2,062,615	+				-0.7
2,062,615	+				+0.1
2,062,615	+				-0.8
2,062,615	+				-0.4
2,062,615	+				+0.3
2,062,622	-				+1.1
2,062,622	-				+0.2
2,062,622	-				-0.6
2,062,622	-				-1.6
2,062,622	-				-3.6
2,062,622	-				-2.8
2,062,622	-				+2.4
2,062,622	-				+0.5
2,062,622	-				-2.2
2,062,622	-				-4.2
2,062,623	-				+0.4
2,062,623	-				+1.5
2,062,623	-				-0.0
2,062,623	-				-1.2
2,062,623	-				-3.6
2,062,623	-				-0.5
2,062,623	-				+1.2
2,062,623	-				+0.7
2,062,623	-				+0.1
2,062,623	-				-1.6
2,062,623	-				-3.7
2,062,623	-				-0.1
2,062,623	-				-0.5
2,062,648	+				+0.5
2,062,648	+				+0.9
2,062,648	+				+0.6
2,062,656	-				+1.4
2,062,688	-				+0.5
2,062,711	+				+1.6
2,062,711	+				+1.2
2,062,721	+		SO1956	0.10	-0.4
2,062,721	+		SO1956	0.10	+0.3
2,062,721	+		SO1956	0.10	+1.7
2,062,729	-		SO1956	0.11	-3.3
2,062,729	-		SO1956	0.11	-1.3
2,062,741	+		SO1956	0.13	+1.6
2,062,748	+		SO1956	0.15	+2.4
2,062,755	+		SO1956	0.16	-3.4
2,062,756	-		SO1956	0.16	-2.6
2,062,756	-		SO1956	0.16	+0.9
2,062,763	-		SO1956	0.17	+0.3
2,062,805	+		SO1956	0.24	+3.8
2,062,805	+		SO1956	0.24	+1.0
2,062,805	+		SO1956	0.24	+1.1
2,062,805	+		SO1956	0.24	+0.6
2,062,805	+		SO1956	0.24	+1.0
2,062,813	-		SO1956	0.25	+2.4
2,062,813	-		SO1956	0.25	+0.5
2,062,813	-		SO1956	0.25	-3.0
2,062,813	-		SO1956	0.25	+0.1
2,062,813	-		SO1956	0.25	+1.8
2,062,813	-		SO1956	0.25	+1.6
2,062,813	-		SO1956	0.25	+0.9
2,062,813	-		SO1956	0.25	+0.8
2,062,813	-		SO1956	0.25	-1.1
2,062,813	-		SO1956	0.25	+0.1
2,062,813	-		SO1956	0.25	+0.7
2,062,813	-		SO1956	0.25	-2.2
2,062,854	+		SO1956	0.32	-0.5
2,062,862	-		SO1956	0.33	+0.6
2,062,869	+		SO1956	0.34	+0.2
2,062,884	-		SO1956	0.37	-3.8
2,062,887	+		SO1956	0.37	+3.0
2,062,887	+		SO1956	0.37	+1.3
2,062,887	+		SO1956	0.37	+0.1
2,062,887	+		SO1956	0.37	+1.3
2,062,887	+		SO1956	0.37	-0.9
2,062,887	+		SO1956	0.37	-5.5
2,062,894	+		SO1956	0.39	+0.4
2,062,894	+		SO1956	0.39	-1.0
2,062,895	-		SO1956	0.39	-0.1
2,062,895	-		SO1956	0.39	-3.2
2,062,895	-		SO1956	0.39	-3.8
2,062,895	-		SO1956	0.39	-0.2
2,062,895	-		SO1956	0.39	+1.9
2,062,895	-		SO1956	0.39	-0.0
2,062,895	-		SO1956	0.39	+1.3
2,062,896	-		SO1956	0.39	-4.4
2,062,902	-		SO1956	0.40	+2.3
2,062,914	-		SO1956	0.42	+0.6
2,062,975	+		SO1956	0.52	-1.7
2,062,983	-		SO1956	0.53	+1.8
2,062,999	+		SO1956	0.56	+1.9
2,063,073	+		SO1956	0.68	-2.4
2,063,107	+		SO1956	0.74	+1.3
2,063,107	+		SO1956	0.74	-0.0
2,063,109	+		SO1956	0.74	-2.8
2,063,109	+		SO1956	0.74	-4.1
2,063,115	-		SO1956	0.75	+1.2
2,063,132	+		SO1956	0.78	-4.3
2,063,132	+		SO1956	0.78	+0.5
2,063,140	-		SO1956	0.79	+1.9
2,063,140	-		SO1956	0.79	+3.4
2,063,142	+		SO1956	0.79	+0.9
2,063,150	-		SO1956	0.81	-3.4
2,063,150	-		SO1956	0.81	+0.4
2,063,157	-		SO1956	0.82	+1.5
2,063,193	+		SO1956	0.88	+0.8
2,063,336	+				-3.7
2,063,352	+				-0.8
2,063,352	+				-1.2
2,063,377	-				-2.8
2,063,390	-				-0.7
2,063,394	+		SO1957	0.10	+0.8
2,063,403	-		SO1957	0.11	+1.1
2,063,444	+		SO1957	0.14	+0.2
2,063,486	+		SO1957	0.18	+0.0
2,063,486	+		SO1957	0.18	-3.3
2,063,495	-		SO1957	0.19	-0.1
2,063,604	+		SO1957	0.28	+1.5
2,063,636	+		SO1957	0.31	+1.2
2,063,636	+		SO1957	0.31	+0.4
2,063,636	+		SO1957	0.31	-1.1
2,063,636	+		SO1957	0.31	-2.2
2,063,636	+		SO1957	0.31	+0.6
2,063,636	+		SO1957	0.31	+0.1
2,063,636	+		SO1957	0.31	-3.9
2,063,636	+		SO1957	0.31	+2.4
2,063,636	+		SO1957	0.31	-2.1
2,063,644	-		SO1957	0.32	+0.2
2,063,644	-		SO1957	0.32	+0.5
2,063,644	-		SO1957	0.32	-0.1
2,063,644	-		SO1957	0.32	+0.0
2,063,644	-		SO1957	0.32	+0.0
2,063,644	-		SO1957	0.32	+0.4
2,063,644	-		SO1957	0.32	+0.6
2,063,644	-		SO1957	0.32	+1.3
2,063,644	-		SO1957	0.32	+2.6
2,063,659	-		SO1957	0.33	-0.2
2,063,659	-		SO1957	0.33	+0.8
2,063,727	-		SO1957	0.39	-2.2
2,063,863	+		SO1957	0.50	-3.1
2,063,896	+		SO1957	0.53	-0.1
2,063,983	-		SO1957	0.61	-4.5
2,064,007	+		SO1957	0.63	-3.1
2,064,007	+		SO1957	0.63	+0.7
2,064,007	+		SO1957	0.63	-2.2
2,064,007	+		SO1957	0.63	+0.2
2,064,007	+		SO1957	0.63	+2.2
2,064,007	+		SO1957	0.63	+0.9
2,064,015	-		SO1957	0.63	+0.4
2,064,015	-		SO1957	0.63	-1.6
2,064,015	-		SO1957	0.63	+0.7
2,064,015	-		SO1957	0.63	-0.0
2,064,015	-		SO1957	0.63	+0.7
2,064,015	-		SO1957	0.63	+2.1
2,064,015	-		SO1957	0.63	+1.5
2,064,015	-		SO1957	0.63	+1.1
2,064,054	+		SO1957	0.67	-1.0
2,064,134	-		SO1957	0.74	+0.7
2,064,175	-		SO1957	0.77	-2.8
2,064,378	-				-3.5
2,064,378	-				-5.1
2,064,395	-				-0.1
2,064,395	-				-0.6
2,064,409	-				-0.8
2,064,431	-				-0.2
2,064,450	-				+0.3
2,064,500	+				+1.2
2,064,534	+		SO1958	0.15	-4.4
2,064,669	-		SO1958	0.45	-0.0
2,064,721	+		SO1958	0.56	-0.2
2,064,854	+		SO1958	0.85	-0.7
2,064,869	-		SO1958	0.88	-1.1
2,065,080	+				+1.6
2,065,088	-				-1.2
2,065,180	+		SO1959	0.18	+0.7
2,065,188	-		SO1959	0.19	+1.4
2,065,211	+		SO1959	0.22	+2.4
2,065,219	-		SO1959	0.22	+1.1
2,065,261	+		SO1959	0.27	-0.8
2,065,261	+		SO1959	0.27	-0.7
2,065,269	-		SO1959	0.28	-2.3
2,065,336	-		SO1959	0.35	-2.2
2,065,346	-		SO1959	0.36	-1.8