Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS05385

Experiment: Glucose (C) and Betaine (N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Betaine (N); with MOPS; with chloride
1,200,054	+		PFLU_RS05375	0.42	-0.6
1,200,055	-		PFLU_RS05375	0.42	+0.0
1,200,055	-		PFLU_RS05375	0.42	-0.8
1,200,077	+		PFLU_RS05375	0.45	+1.2
1,200,077	+		PFLU_RS05375	0.45	-0.4
1,200,077	+		PFLU_RS05375	0.45	-0.6
1,200,078	-		PFLU_RS05375	0.45	-1.3
1,200,078	-		PFLU_RS05375	0.45	-0.7
1,200,078	-		PFLU_RS05375	0.45	+1.1
1,200,113	+		PFLU_RS05375	0.49	-0.6
1,200,113	+		PFLU_RS05375	0.49	-2.2
1,200,113	+		PFLU_RS05375	0.49	+0.2
1,200,114	-		PFLU_RS05375	0.49	-0.6
1,200,114	-		PFLU_RS05375	0.49	-1.1
1,200,114	-		PFLU_RS05375	0.49	-0.1
1,200,181	+		PFLU_RS05375	0.57	+1.2
1,200,182	+		PFLU_RS05375	0.57	+0.4
1,200,224	+		PFLU_RS05375	0.62	-0.1
1,200,225	-		PFLU_RS05375	0.62	-1.7
1,200,225	-		PFLU_RS05375	0.62	-1.0
1,200,255	-		PFLU_RS05375	0.65	+0.9
1,200,471	+				-1.4
1,200,471	+				+2.0
1,200,471	+				-1.8
1,200,472	-				+0.5
1,200,472	-				-0.3
1,200,472	-				+0.7
1,200,472	-				-1.0
1,200,472	-				-1.0
1,200,472	-				+0.3
1,200,472	-				+1.0
1,200,479	+				+0.0
1,200,527	+				+0.3
1,200,527	+				-1.3
1,200,527	+				+0.8
1,200,527	+				-0.8
1,200,527	+				-0.3
1,200,527	+				+0.3
1,200,527	+				-1.4
1,200,527	+				-0.8
1,200,527	+				+0.7
1,200,527	+				-0.3
1,200,527	+				-1.3
1,200,527	+				-0.7
1,200,527	+				-1.1
1,200,527	+				+0.6
1,200,528	-				-1.3
1,200,528	-				-1.4
1,200,528	-				-0.2
1,200,528	-				-2.5
1,200,528	-				+1.2
1,200,528	-				-1.1
1,200,528	-				+0.7
1,200,528	-				+0.5
1,200,528	-				+0.2
1,200,528	-				+0.7
1,200,528	-				+0.5
1,200,528	-				-0.8
1,200,528	-				+0.2
1,200,563	+				+0.6
1,200,569	+				-1.5
1,200,569	+				-0.1
1,200,629	-		PFLU_RS05380	0.18	-1.0
1,200,629	-		PFLU_RS05380	0.18	-1.7
1,200,733	-		PFLU_RS05380	0.43	+1.4
1,200,771	+		PFLU_RS05380	0.52	+1.2
1,200,771	+		PFLU_RS05380	0.52	-1.1
1,200,772	-		PFLU_RS05380	0.52	-0.6
1,200,772	-		PFLU_RS05380	0.52	-2.1
1,200,796	+		PFLU_RS05380	0.58	-0.6
1,200,797	-		PFLU_RS05380	0.58	-0.6
1,200,797	-		PFLU_RS05380	0.58	+0.0
1,200,797	-		PFLU_RS05380	0.58	-0.1
1,200,797	-		PFLU_RS05380	0.58	+0.2
1,201,028	+				-1.6
1,201,029	-				+2.3
1,201,055	+				-2.7
1,201,055	+				-2.9
1,201,055	+				-2.3
1,201,055	+				+0.7
1,201,055	+				-2.0
1,201,055	+				-1.1
1,201,055	+				+0.2
1,201,055	+				-2.7
1,201,055	+				+0.2
1,201,055	+				-0.8
1,201,055	+				-1.1
1,201,055	+				-2.4
1,201,055	+				-2.8
1,201,055	+				-2.9
1,201,055	+				+0.2
1,201,056	-				-1.4
1,201,056	-				-2.3
1,201,056	-				+0.0
1,201,056	-				-1.0
1,201,056	-				+0.7
1,201,056	-				-0.6
1,201,056	-				-1.3
1,201,056	-				+0.7
1,201,056	-				-0.3
1,201,056	-				-0.8
1,201,056	-				-1.8
1,201,056	-				-2.4
1,201,056	-				-2.7
1,201,056	-				-3.1
1,201,056	-				-0.6
1,201,056	-				-3.2
1,201,071	+				-0.7
1,201,109	+				-3.5
1,201,109	+				-0.3
1,201,109	+				-0.8
1,201,109	+				-2.8
1,201,109	+				-1.6
1,201,109	+				-1.4
1,201,109	+				-2.1
1,201,109	+				-0.1
1,201,109	+				-1.3
1,201,110	-				-1.4
1,201,110	-				+1.7
1,201,110	-				-2.2
1,201,133	+				-0.3
1,201,133	+				-1.7
1,201,133	+				-3.6
1,201,134	-				-2.4
1,201,134	-				+0.0
1,201,134	-				-1.7
1,201,134	-				+1.3
1,201,134	-				-1.8
1,201,134	-				-2.5
1,201,205	+				-2.5
1,201,206	-				-1.6
1,201,206	-				-1.7
1,201,218	-				-2.4
1,201,218	-				-2.3
1,201,281	+		PFLU_RS05385	0.11	-0.0
1,201,281	+		PFLU_RS05385	0.11	-0.3
1,201,281	+		PFLU_RS05385	0.11	-2.6
1,201,282	-		PFLU_RS05385	0.11	-2.2
1,201,282	-		PFLU_RS05385	0.11	-1.3
1,201,282	-		PFLU_RS05385	0.11	-2.3
1,201,282	-		PFLU_RS05385	0.11	-0.1
1,201,282	-		PFLU_RS05385	0.11	+0.7
1,201,285	+		PFLU_RS05385	0.11	-1.5
1,201,285	+		PFLU_RS05385	0.11	-2.2
1,201,285	+		PFLU_RS05385	0.11	-2.2
1,201,285	+		PFLU_RS05385	0.11	-2.7
1,201,286	-		PFLU_RS05385	0.11	-1.1
1,201,388	+		PFLU_RS05385	0.15	-1.8
1,201,388	+		PFLU_RS05385	0.15	-1.1
1,201,388	+		PFLU_RS05385	0.15	+1.4
1,201,388	+		PFLU_RS05385	0.15	-2.4
1,201,388	+		PFLU_RS05385	0.15	-1.1
1,201,388	+		PFLU_RS05385	0.15	-3.4
1,201,388	+		PFLU_RS05385	0.15	-0.6
1,201,388	+		PFLU_RS05385	0.15	-1.7
1,201,389	-		PFLU_RS05385	0.15	-1.3
1,201,389	-		PFLU_RS05385	0.15	+0.9
1,201,389	-		PFLU_RS05385	0.15	-0.7
1,201,389	-		PFLU_RS05385	0.15	-0.6
1,201,389	-		PFLU_RS05385	0.15	-1.4
1,201,556	+		PFLU_RS05385	0.22	-2.6
1,201,556	+		PFLU_RS05385	0.22	-1.6
1,201,556	+		PFLU_RS05385	0.22	-1.4
1,201,556	+		PFLU_RS05385	0.22	-1.1
1,201,556	+		PFLU_RS05385	0.22	-2.8
1,201,556	+		PFLU_RS05385	0.22	-1.6
1,201,556	+		PFLU_RS05385	0.22	-1.1
1,201,556	+		PFLU_RS05385	0.22	-1.8
1,201,556	+		PFLU_RS05385	0.22	+1.7
1,201,556	+		PFLU_RS05385	0.22	-1.6
1,201,557	-		PFLU_RS05385	0.22	-1.2
1,201,557	-		PFLU_RS05385	0.22	-0.6
1,201,557	-		PFLU_RS05385	0.22	+0.2
1,201,557	-		PFLU_RS05385	0.22	-1.3
1,201,557	-		PFLU_RS05385	0.22	-1.1
1,201,557	-		PFLU_RS05385	0.22	+0.4
1,201,557	-		PFLU_RS05385	0.22	-1.7
1,201,557	-		PFLU_RS05385	0.22	-0.3
1,201,557	-		PFLU_RS05385	0.22	-1.4
1,201,557	-		PFLU_RS05385	0.22	-3.1
1,201,557	-		PFLU_RS05385	0.22	-1.5
1,201,557	-		PFLU_RS05385	0.22	-2.7
1,201,557	-		PFLU_RS05385	0.22	-1.4
1,201,557	-		PFLU_RS05385	0.22	-1.4
1,201,629	+		PFLU_RS05385	0.25	-2.1
1,201,629	+		PFLU_RS05385	0.25	-1.4
1,201,630	-		PFLU_RS05385	0.25	+0.3
1,201,630	-		PFLU_RS05385	0.25	-0.8
1,201,630	-		PFLU_RS05385	0.25	-3.2
1,201,630	-		PFLU_RS05385	0.25	-0.3
1,201,889	+		PFLU_RS05385	0.36	-1.3
1,201,889	+		PFLU_RS05385	0.36	-0.2
1,201,889	+		PFLU_RS05385	0.36	-1.8
1,201,889	+		PFLU_RS05385	0.36	+0.9
1,201,889	+		PFLU_RS05385	0.36	-2.0
1,201,889	+		PFLU_RS05385	0.36	-1.6
1,201,889	+		PFLU_RS05385	0.36	-0.3
1,201,889	+		PFLU_RS05385	0.36	+1.7
1,201,889	+		PFLU_RS05385	0.36	+0.2
1,201,890	-		PFLU_RS05385	0.36	+0.3
1,201,890	-		PFLU_RS05385	0.36	-1.4
1,201,890	-		PFLU_RS05385	0.36	-0.6
1,201,890	-		PFLU_RS05385	0.36	-1.5
1,201,890	-		PFLU_RS05385	0.36	+0.4
1,201,890	-		PFLU_RS05385	0.36	-2.4
1,201,890	-		PFLU_RS05385	0.36	-1.9
1,201,890	-		PFLU_RS05385	0.36	+1.1
1,201,890	-		PFLU_RS05385	0.36	-0.6
1,201,890	-		PFLU_RS05385	0.36	-2.7
1,201,890	-		PFLU_RS05385	0.36	-0.6
1,201,890	-		PFLU_RS05385	0.36	-1.5
1,201,890	-		PFLU_RS05385	0.36	-0.0
1,202,067	-		PFLU_RS05385	0.43	-3.4
1,202,099	+		PFLU_RS05385	0.44	+0.7
1,202,132	+		PFLU_RS05385	0.46	-2.7
1,202,132	+		PFLU_RS05385	0.46	-3.0
1,202,132	+		PFLU_RS05385	0.46	-0.7
1,202,132	+		PFLU_RS05385	0.46	+0.0
1,202,132	+		PFLU_RS05385	0.46	-1.4
1,202,132	+		PFLU_RS05385	0.46	-2.6
1,202,133	-		PFLU_RS05385	0.46	-3.2
1,202,133	-		PFLU_RS05385	0.46	-0.0
1,202,133	-		PFLU_RS05385	0.46	-0.8
1,202,195	+		PFLU_RS05385	0.48	-0.1
1,202,195	+		PFLU_RS05385	0.48	-1.7
1,202,195	+		PFLU_RS05385	0.48	-0.6
1,202,195	+		PFLU_RS05385	0.48	-0.1
1,202,195	+		PFLU_RS05385	0.48	-1.3
1,202,195	+		PFLU_RS05385	0.48	-0.3
1,202,195	+		PFLU_RS05385	0.48	-3.4
1,202,195	+		PFLU_RS05385	0.48	-1.3
1,202,196	-		PFLU_RS05385	0.48	-2.3
1,202,196	-		PFLU_RS05385	0.48	-1.9
1,202,196	-		PFLU_RS05385	0.48	-1.1
1,202,196	-		PFLU_RS05385	0.48	-0.6
1,202,381	+		PFLU_RS05385	0.56	-0.6
1,202,381	+		PFLU_RS05385	0.56	-1.6
1,202,381	+		PFLU_RS05385	0.56	-0.3
1,202,381	+		PFLU_RS05385	0.56	-0.6
1,202,381	+		PFLU_RS05385	0.56	-0.3
1,202,381	+		PFLU_RS05385	0.56	-0.5
1,202,382	-		PFLU_RS05385	0.56	-2.1
1,202,382	-		PFLU_RS05385	0.56	-0.6
1,202,382	-		PFLU_RS05385	0.56	-0.9
1,202,382	-		PFLU_RS05385	0.56	-1.4
1,202,382	-		PFLU_RS05385	0.56	+1.2
1,202,382	-		PFLU_RS05385	0.56	+0.0
1,202,384	+		PFLU_RS05385	0.56	-2.9
1,202,384	+		PFLU_RS05385	0.56	-0.8
1,202,384	+		PFLU_RS05385	0.56	-0.3
1,202,515	-		PFLU_RS05385	0.62	-0.8
1,202,515	-		PFLU_RS05385	0.62	+0.2
1,202,515	-		PFLU_RS05385	0.62	-2.2
1,202,600	+		PFLU_RS05385	0.65	-1.3
1,202,600	+		PFLU_RS05385	0.65	-0.3
1,202,601	-		PFLU_RS05385	0.65	+0.4
1,202,601	-		PFLU_RS05385	0.65	-1.0
1,202,601	-		PFLU_RS05385	0.65	-1.6
1,202,601	-		PFLU_RS05385	0.65	-1.3
1,202,601	-		PFLU_RS05385	0.65	+0.6
1,202,741	+		PFLU_RS05385	0.71	-2.4
1,202,741	+		PFLU_RS05385	0.71	-1.0
1,202,741	+		PFLU_RS05385	0.71	-0.7
1,202,741	+		PFLU_RS05385	0.71	-2.5
1,202,741	+		PFLU_RS05385	0.71	+0.2
1,202,741	+		PFLU_RS05385	0.71	-2.5
1,202,741	+		PFLU_RS05385	0.71	+0.2
1,202,741	+		PFLU_RS05385	0.71	-0.8
1,202,741	+		PFLU_RS05385	0.71	+0.3
1,202,741	+		PFLU_RS05385	0.71	-0.8
1,202,741	+		PFLU_RS05385	0.71	-1.7
1,202,741	+		PFLU_RS05385	0.71	-1.3
1,202,742	-		PFLU_RS05385	0.71	-0.4
1,202,742	-		PFLU_RS05385	0.71	-0.6
1,202,742	-		PFLU_RS05385	0.71	-1.2
1,202,742	-		PFLU_RS05385	0.71	-1.5
1,202,742	-		PFLU_RS05385	0.71	-1.6
1,202,742	-		PFLU_RS05385	0.71	-1.4
1,202,742	-		PFLU_RS05385	0.71	-2.0
1,202,742	-		PFLU_RS05385	0.71	-3.1
1,202,742	-		PFLU_RS05385	0.71	-1.4
1,202,742	-		PFLU_RS05385	0.71	-0.4
1,202,885	+		PFLU_RS05385	0.77	-0.0
1,202,885	+		PFLU_RS05385	0.77	-1.4
1,202,897	+		PFLU_RS05385	0.78	-1.2
1,202,912	+		PFLU_RS05385	0.78	+2.7
1,203,233	+				+0.7
1,203,233	+				-2.1
1,203,233	+				-2.4
1,203,233	+				-1.8
1,203,233	+				+0.0
1,203,233	+				-1.0
1,203,233	+				-0.7
1,203,308	+				-0.4
1,203,308	+				-1.8
1,203,308	+				-2.2
1,203,308	+				-2.4
1,203,308	+				-1.2
1,203,308	+				-0.5
1,203,308	+				-0.8
1,203,309	-				-0.1
1,203,309	-				-2.2
1,203,309	-				-0.8
1,203,309	-				+0.9
1,203,309	-				-0.8
1,203,309	-				+0.4
1,203,309	-				-1.6
1,203,311	+				-3.1
1,203,311	+				+0.4
1,203,311	+				+0.2
1,203,311	+				-0.4
1,203,311	+				-2.6
1,203,311	+				-1.1
1,203,312	-				-0.3
1,203,312	-				-2.1
1,203,312	-				-2.0
1,203,312	-				-1.1
1,203,312	-				-2.3
1,203,312	-				+0.9
1,203,312	-				-0.6
1,203,312	-				-1.1
1,203,312	-				-3.2
1,203,312	-				-1.7
1,203,388	+				-1.4
1,203,388	+				-1.1
1,203,438	+				-2.6
1,203,438	+				-2.3
1,203,438	+				-1.8
1,203,438	+				-2.9
1,203,438	+				-3.0
1,203,438	+				+0.2
1,203,438	+				+0.3
1,203,438	+				-0.4
1,203,438	+				-2.0
1,203,438	+				-1.8
1,203,438	+				-0.3
1,203,438	+				-1.3
1,203,438	+				-1.7
1,203,438	+				+1.3
1,203,438	+				-0.7
1,203,438	+				-2.4
1,203,438	+				-1.1
1,203,438	+				+1.5
1,203,438	+				-1.0
1,203,438	+				-0.2
1,203,438	+				-0.6
1,203,439	-				-2.7
1,203,439	-				+0.5
1,203,439	-				-1.3
1,203,439	-				-0.5
1,203,439	-				+1.2
1,203,439	-				-2.3
1,203,439	-				-0.3
1,203,439	-				-2.2
1,203,439	-				-1.4
1,203,439	-				+2.6
1,203,439	-				-1.8
1,203,439	-				-2.5
1,203,439	-				+0.2
1,203,439	-				-1.4
1,203,439	-				-1.7
1,203,466	+				-0.8
1,203,466	+				+0.3
1,203,466	+				-1.1
1,203,466	+				+0.2
1,203,466	+				+0.7
1,203,466	+				+0.2
1,203,466	+				-0.6
1,203,467	-				-1.4
1,203,467	-				+0.0
1,203,467	-				-1.3
1,203,467	-				-0.9
1,203,467	-				+0.4
1,203,467	-				+0.5
1,203,467	-				-3.7
1,203,467	-				+1.0
1,203,467	-				-0.4
1,203,467	-				-0.6
1,203,467	-				-2.4
1,203,467	-				-0.7
1,203,467	-				-1.6
1,203,470	+				+0.1
1,203,470	+				+1.1
1,203,470	+				-1.4
1,203,471	-				+0.4
1,203,471	-				+0.4
1,203,471	-				-0.4
1,203,471	-				+0.5
1,203,491	+				-0.6
1,203,491	+				-1.1
1,203,492	-				+0.7
1,203,492	-				-1.1
1,203,492	-				+0.2
1,203,492	-				+1.5
1,203,492	-				+0.4
1,203,525	+				+1.6
1,203,525	+				+1.5
1,203,525	+				+0.5
1,203,526	-				+0.3
1,203,526	-				-1.6
1,203,526	-				-0.6
1,203,526	-				+0.2
1,203,526	-				-1.4
1,203,545	+				+0.4
1,203,574	+				+0.1
1,203,574	+				+0.1
1,203,597	-				+0.8
1,203,684	+				-2.9
1,203,685	-				+0.4
1,203,753	+				-1.0
1,203,753	+				+0.1
1,203,754	-				-0.4
1,203,794	-				+1.3
1,203,839	+				+0.5
1,203,840	-				-1.1
1,203,849	+				-0.6
1,203,849	+				-0.4
1,203,849	+				-0.9
1,203,850	-				+0.3
1,203,850	-				-0.3
1,203,850	-				+0.1
1,203,850	-				+0.1
1,203,856	+				+0.3
1,203,856	+				-1.0
1,203,856	+				-0.0
1,203,856	+				+0.5
1,203,856	+				-2.9
1,203,856	+				+0.5
1,203,856	+				-0.2
1,203,856	+				-0.3
1,203,856	+				+1.3
1,203,856	+				+0.0
1,203,856	+				-0.7
1,203,856	+				+0.7
1,203,856	+				-1.2
1,203,856	+				-0.9
1,203,856	+				-0.5
1,203,857	-				-0.1
1,203,857	-				+1.2
1,203,857	-				+0.2
1,203,857	-				+1.9
1,203,857	-				+1.1
1,203,857	-				-0.3
1,203,857	-				+0.8
1,203,857	-				+0.7
1,203,857	-				-0.3
1,203,857	-				+0.5
1,203,857	-				-1.3
1,203,857	-				-0.7
1,203,857	-				+1.8
1,203,857	-				-0.4
1,203,857	-				-1.5
1,203,857	-				+1.2
1,203,857	-				+0.5
1,203,866	+				+1.3
1,203,866	+				+1.0
1,203,866	+				+0.6
1,203,866	+				-0.3
1,203,866	+				-0.1
1,203,866	+				-1.7
1,203,866	+				-1.6
1,203,866	+				+1.1
1,203,866	+				+0.1
1,203,867	-				+1.7
1,203,867	-				-0.2
1,203,867	-				-0.0
1,203,867	-				-0.7
1,203,932	-				-0.9
1,204,031	+				-0.1
1,204,031	+				-1.0
1,204,031	+				+0.1
1,204,031	+				+0.1
1,204,031	+				-0.4
1,204,032	-				+0.1
1,204,032	-				-2.0
1,204,032	-				-1.4
1,204,032	-				+0.1
1,204,032	-				-1.0
1,204,032	-				+0.6
1,204,032	-				-0.3
1,204,032	-				-3.3
1,204,033	+				-0.1
1,204,033	+				+1.7
1,204,033	+				-0.4
1,204,033	+				-0.4
1,204,033	+				-0.0
1,204,033	+				-0.3
1,204,033	+				-2.3
1,204,033	+				+0.9
1,204,033	+				+0.6
1,204,033	+				+0.1
1,204,034	-				-0.1
1,204,034	-				-0.4
1,204,034	-				+0.4
1,204,034	-				+0.7
1,204,034	-				-0.7
1,204,147	-		PFLU_RS05390	0.14	+0.8
1,204,201	+		PFLU_RS05390	0.17	+0.1
1,204,202	-		PFLU_RS05390	0.17	+0.9
1,204,303	+		PFLU_RS05390	0.22	+0.3
1,204,303	+		PFLU_RS05390	0.22	+1.2
1,204,303	+		PFLU_RS05390	0.22	-1.6
1,204,304	-		PFLU_RS05390	0.22	-0.1
1,204,304	-		PFLU_RS05390	0.22	+0.6
1,204,304	-		PFLU_RS05390	0.22	-0.3
1,204,310	-		PFLU_RS05390	0.23	-0.8
1,204,310	-		PFLU_RS05390	0.23	-1.2
1,204,310	-		PFLU_RS05390	0.23	+1.9
1,204,381	+		PFLU_RS05390	0.26	+0.3
1,204,381	+		PFLU_RS05390	0.26	-1.3
1,204,381	+		PFLU_RS05390	0.26	-0.7
1,204,381	+		PFLU_RS05390	0.26	+0.8
1,204,381	+		PFLU_RS05390	0.26	+0.5
1,204,381	+		PFLU_RS05390	0.26	-0.9
1,204,381	+		PFLU_RS05390	0.26	-0.8
1,204,381	+		PFLU_RS05390	0.26	+0.8
1,204,382	-		PFLU_RS05390	0.26	-1.3
1,204,382	-		PFLU_RS05390	0.26	+2.1
1,204,382	-		PFLU_RS05390	0.26	+0.9
1,204,382	-		PFLU_RS05390	0.26	+0.4
1,204,382	-		PFLU_RS05390	0.26	+0.5
1,204,382	-		PFLU_RS05390	0.26	+0.3
1,204,382	-		PFLU_RS05390	0.26	-2.9
1,204,399	+		PFLU_RS05390	0.27	-2.3
1,204,399	+		PFLU_RS05390	0.27	-0.0
1,204,399	+		PFLU_RS05390	0.27	+1.5
1,204,399	+		PFLU_RS05390	0.27	-0.3
1,204,400	-		PFLU_RS05390	0.27	+2.3
1,204,400	-		PFLU_RS05390	0.27	-0.6
1,204,400	-		PFLU_RS05390	0.27	-2.1