Experiment: Carbon source D-Mannitol 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_30165 and AO356_30170 are separated by 459 nucleotides AO356_30170 and AO356_30175 overlap by 4 nucleotides
AO356_30165: AO356_30165 - hypothetical protein, at 7,040,608 to 7,041,681
_30165
AO356_30170: AO356_30170 - cytochrome B, at 7,042,141 to 7,042,719
_30170
AO356_30175: AO356_30175 - caspase, at 7,042,716 to 7,043,798
_30175
Position (kb)
7042
7043 Strain fitness (log2 ratio)
-2
-1
0
1 at 7041.218 kb on + strand, within AO356_30165 at 7041.381 kb on + strand, within AO356_30165 at 7041.381 kb on + strand, within AO356_30165 at 7041.422 kb on + strand, within AO356_30165 at 7041.423 kb on - strand, within AO356_30165 at 7041.579 kb on - strand at 7041.619 kb on + strand at 7041.620 kb on - strand at 7041.620 kb on - strand at 7041.738 kb on + strand at 7041.739 kb on - strand at 7041.779 kb on + strand at 7041.782 kb on - strand at 7041.787 kb on - strand at 7041.821 kb on - strand at 7041.821 kb on - strand at 7041.821 kb on - strand at 7041.821 kb on - strand at 7041.978 kb on + strand at 7041.978 kb on + strand at 7041.979 kb on - strand at 7042.081 kb on - strand at 7042.081 kb on - strand at 7042.081 kb on - strand at 7042.299 kb on + strand, within AO356_30170 at 7042.300 kb on - strand, within AO356_30170 at 7042.300 kb on - strand, within AO356_30170 at 7042.300 kb on - strand, within AO356_30170 at 7042.300 kb on - strand, within AO356_30170 at 7042.300 kb on - strand, within AO356_30170 at 7042.439 kb on + strand, within AO356_30170 at 7042.439 kb on + strand, within AO356_30170 at 7042.440 kb on - strand, within AO356_30170 at 7042.440 kb on - strand, within AO356_30170 at 7042.598 kb on + strand, within AO356_30170 at 7042.598 kb on + strand, within AO356_30170 at 7042.599 kb on - strand, within AO356_30170 at 7042.768 kb on + strand at 7042.798 kb on + strand at 7043.127 kb on + strand, within AO356_30175 at 7043.142 kb on - strand, within AO356_30175 at 7043.515 kb on + strand, within AO356_30175 at 7043.516 kb on - strand, within AO356_30175 at 7043.516 kb on - strand, within AO356_30175
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Mannitol 5 mM remove 7,041,218 + AO356_30165 0.57 -0.0 7,041,381 + AO356_30165 0.72 +1.5 7,041,381 + AO356_30165 0.72 -0.2 7,041,422 + AO356_30165 0.76 -1.1 7,041,423 - AO356_30165 0.76 +0.5 7,041,579 - +0.7 7,041,619 + -0.9 7,041,620 - -1.4 7,041,620 - +0.6 7,041,738 + -0.9 7,041,739 - -0.7 7,041,779 + -0.8 7,041,782 - -1.1 7,041,787 - -1.6 7,041,821 - -0.4 7,041,821 - +0.6 7,041,821 - +0.4 7,041,821 - +0.2 7,041,978 + -0.4 7,041,978 + +0.6 7,041,979 - +1.1 7,042,081 - +0.2 7,042,081 - -0.1 7,042,081 - -0.4 7,042,299 + AO356_30170 0.27 +0.3 7,042,300 - AO356_30170 0.27 -0.1 7,042,300 - AO356_30170 0.27 -0.5 7,042,300 - AO356_30170 0.27 -0.8 7,042,300 - AO356_30170 0.27 +1.2 7,042,300 - AO356_30170 0.27 -0.6 7,042,439 + AO356_30170 0.51 -0.4 7,042,439 + AO356_30170 0.51 +0.2 7,042,440 - AO356_30170 0.52 -0.1 7,042,440 - AO356_30170 0.52 +0.0 7,042,598 + AO356_30170 0.79 -0.9 7,042,598 + AO356_30170 0.79 +0.1 7,042,599 - AO356_30170 0.79 -0.5 7,042,768 + -1.1 7,042,798 + -1.8 7,043,127 + AO356_30175 0.38 +0.0 7,043,142 - AO356_30175 0.39 +1.4 7,043,515 + AO356_30175 0.74 +0.6 7,043,516 - AO356_30175 0.74 -0.3 7,043,516 - AO356_30175 0.74 +0.3
Or see this region's nucleotide sequence