Experiment: Carbon source D-Mannitol 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_30155 and AO356_30160 are separated by 383 nucleotides AO356_30160 and AO356_30165 are separated by 975 nucleotides
AO356_30155: AO356_30155 - hypothetical protein, at 7,038,140 to 7,038,901
_30155
AO356_30160: AO356_30160 - hypothetical protein, at 7,039,285 to 7,039,632
_30160
AO356_30165: AO356_30165 - hypothetical protein, at 7,040,608 to 7,041,681
_30165
Position (kb)
7039
7040 Strain fitness (log2 ratio)
-2
-1
0
1 at 7038.293 kb on - strand, within AO356_30155 at 7038.334 kb on - strand, within AO356_30155 at 7038.385 kb on - strand, within AO356_30155 at 7038.426 kb on + strand, within AO356_30155 at 7038.426 kb on + strand, within AO356_30155 at 7038.427 kb on - strand, within AO356_30155 at 7038.496 kb on - strand, within AO356_30155 at 7038.499 kb on + strand, within AO356_30155 at 7038.500 kb on - strand, within AO356_30155 at 7038.644 kb on - strand, within AO356_30155 at 7038.784 kb on + strand, within AO356_30155 at 7038.917 kb on - strand at 7038.948 kb on + strand at 7038.949 kb on - strand at 7038.991 kb on + strand at 7039.171 kb on + strand at 7039.171 kb on + strand at 7039.171 kb on + strand at 7039.171 kb on + strand at 7039.172 kb on - strand at 7039.172 kb on - strand at 7039.332 kb on + strand, within AO356_30160 at 7039.373 kb on + strand, within AO356_30160 at 7039.373 kb on + strand, within AO356_30160 at 7039.374 kb on - strand, within AO356_30160 at 7039.374 kb on - strand, within AO356_30160 at 7039.374 kb on - strand, within AO356_30160 at 7039.374 kb on - strand, within AO356_30160 at 7039.374 kb on - strand, within AO356_30160 at 7039.374 kb on - strand, within AO356_30160 at 7039.374 kb on - strand, within AO356_30160 at 7039.375 kb on + strand, within AO356_30160 at 7039.375 kb on + strand, within AO356_30160 at 7039.375 kb on + strand, within AO356_30160 at 7039.375 kb on + strand, within AO356_30160 at 7039.375 kb on + strand, within AO356_30160 at 7039.376 kb on - strand, within AO356_30160 at 7039.376 kb on - strand, within AO356_30160 at 7039.376 kb on - strand, within AO356_30160 at 7039.376 kb on - strand, within AO356_30160 at 7039.376 kb on - strand, within AO356_30160 at 7039.376 kb on - strand, within AO356_30160 at 7039.376 kb on - strand, within AO356_30160 at 7039.381 kb on + strand, within AO356_30160 at 7039.381 kb on + strand, within AO356_30160 at 7039.381 kb on + strand, within AO356_30160 at 7039.381 kb on + strand, within AO356_30160 at 7039.381 kb on + strand, within AO356_30160 at 7039.438 kb on + strand, within AO356_30160 at 7039.455 kb on + strand, within AO356_30160 at 7039.455 kb on + strand, within AO356_30160 at 7039.455 kb on + strand, within AO356_30160 at 7039.456 kb on - strand, within AO356_30160 at 7039.456 kb on - strand, within AO356_30160 at 7039.456 kb on - strand, within AO356_30160 at 7039.613 kb on + strand at 7039.647 kb on + strand at 7039.648 kb on - strand at 7039.689 kb on + strand at 7039.689 kb on + strand at 7039.766 kb on - strand at 7039.809 kb on + strand at 7039.809 kb on + strand at 7039.855 kb on + strand at 7039.855 kb on + strand at 7039.856 kb on - strand at 7039.860 kb on - strand at 7039.960 kb on - strand at 7040.037 kb on + strand at 7040.118 kb on - strand at 7040.190 kb on + strand at 7040.229 kb on + strand at 7040.284 kb on + strand at 7040.333 kb on + strand at 7040.334 kb on - strand at 7040.464 kb on + strand at 7040.464 kb on + strand at 7040.465 kb on - strand at 7040.465 kb on - strand at 7040.465 kb on - strand at 7040.465 kb on - strand at 7040.467 kb on + strand at 7040.467 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Mannitol 5 mM remove 7,038,293 - AO356_30155 0.20 +0.6 7,038,334 - AO356_30155 0.25 +0.6 7,038,385 - AO356_30155 0.32 -0.8 7,038,426 + AO356_30155 0.38 +0.5 7,038,426 + AO356_30155 0.38 +0.5 7,038,427 - AO356_30155 0.38 -0.3 7,038,496 - AO356_30155 0.47 -1.9 7,038,499 + AO356_30155 0.47 +0.2 7,038,500 - AO356_30155 0.47 +0.7 7,038,644 - AO356_30155 0.66 +1.0 7,038,784 + AO356_30155 0.85 +0.5 7,038,917 - -0.0 7,038,948 + -2.5 7,038,949 - +0.9 7,038,991 + -1.1 7,039,171 + +0.7 7,039,171 + -0.2 7,039,171 + +0.3 7,039,171 + -0.6 7,039,172 - -1.3 7,039,172 - +1.7 7,039,332 + AO356_30160 0.14 +1.4 7,039,373 + AO356_30160 0.25 -0.8 7,039,373 + AO356_30160 0.25 +0.6 7,039,374 - AO356_30160 0.26 -1.1 7,039,374 - AO356_30160 0.26 -0.3 7,039,374 - AO356_30160 0.26 -0.4 7,039,374 - AO356_30160 0.26 -0.4 7,039,374 - AO356_30160 0.26 +0.4 7,039,374 - AO356_30160 0.26 +0.9 7,039,374 - AO356_30160 0.26 +0.3 7,039,375 + AO356_30160 0.26 -0.0 7,039,375 + AO356_30160 0.26 -0.3 7,039,375 + AO356_30160 0.26 -0.1 7,039,375 + AO356_30160 0.26 -0.0 7,039,375 + AO356_30160 0.26 +1.0 7,039,376 - AO356_30160 0.26 -2.5 7,039,376 - AO356_30160 0.26 +0.2 7,039,376 - AO356_30160 0.26 +0.2 7,039,376 - AO356_30160 0.26 +0.3 7,039,376 - AO356_30160 0.26 +0.0 7,039,376 - AO356_30160 0.26 +0.4 7,039,376 - AO356_30160 0.26 +0.3 7,039,381 + AO356_30160 0.28 +0.4 7,039,381 + AO356_30160 0.28 -0.2 7,039,381 + AO356_30160 0.28 +0.9 7,039,381 + AO356_30160 0.28 -0.2 7,039,381 + AO356_30160 0.28 -0.2 7,039,438 + AO356_30160 0.44 +1.3 7,039,455 + AO356_30160 0.49 -0.6 7,039,455 + AO356_30160 0.49 +0.2 7,039,455 + AO356_30160 0.49 -1.2 7,039,456 - AO356_30160 0.49 +0.5 7,039,456 - AO356_30160 0.49 -1.5 7,039,456 - AO356_30160 0.49 -0.2 7,039,613 + +0.5 7,039,647 + +0.8 7,039,648 - -0.2 7,039,689 + -1.6 7,039,689 + -0.4 7,039,766 - -0.7 7,039,809 + +1.5 7,039,809 + +0.5 7,039,855 + +0.4 7,039,855 + -0.6 7,039,856 - +0.6 7,039,860 - +0.6 7,039,960 - -0.9 7,040,037 + +1.1 7,040,118 - +0.9 7,040,190 + +0.5 7,040,229 + -0.0 7,040,284 + -0.4 7,040,333 + -1.1 7,040,334 - +0.0 7,040,464 + -0.6 7,040,464 + -0.1 7,040,465 - -0.6 7,040,465 - +0.3 7,040,465 - -1.8 7,040,465 - -0.5 7,040,467 + -0.2 7,040,467 + +0.1
Or see this region's nucleotide sequence