Experiment: Carbon source D-Mannitol 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24985 and AO356_24990 are separated by 312 nucleotides AO356_24990 and AO356_24995 are separated by 128 nucleotides
AO356_24985: AO356_24985 - 3-oxoacyl-ACP reductase, at 5,661,567 to 5,662,301
_24985
AO356_24990: AO356_24990 - 4-oxalocrotonate tautomerase, at 5,662,614 to 5,662,820
_24990
AO356_24995: AO356_24995 - LysR family transcriptional regulator, at 5,662,949 to 5,663,872
_24995
Position (kb) 5662
5663 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5661.640 kb on + strand at 5661.640 kb on + strand at 5661.953 kb on - strand, within AO356_24985 at 5661.953 kb on - strand, within AO356_24985 at 5662.214 kb on + strand, within AO356_24985 at 5662.214 kb on + strand, within AO356_24985 at 5662.215 kb on - strand, within AO356_24985 at 5662.215 kb on - strand, within AO356_24985 at 5662.216 kb on + strand, within AO356_24985 at 5662.217 kb on - strand, within AO356_24985 at 5662.217 kb on - strand, within AO356_24985 at 5662.217 kb on - strand, within AO356_24985 at 5662.217 kb on - strand, within AO356_24985 at 5662.421 kb on + strand at 5662.615 kb on + strand at 5662.616 kb on - strand at 5662.670 kb on + strand, within AO356_24990 at 5662.670 kb on + strand, within AO356_24990 at 5662.882 kb on + strand at 5662.882 kb on + strand at 5662.882 kb on + strand at 5662.882 kb on + strand at 5662.882 kb on + strand at 5662.883 kb on - strand at 5662.883 kb on - strand at 5662.886 kb on + strand at 5662.887 kb on - strand at 5662.889 kb on - strand at 5662.986 kb on + strand at 5662.986 kb on + strand at 5662.986 kb on + strand at 5662.986 kb on + strand at 5662.986 kb on + strand at 5662.986 kb on + strand at 5662.987 kb on - strand at 5662.987 kb on - strand at 5662.987 kb on - strand at 5662.987 kb on - strand at 5662.987 kb on - strand at 5663.159 kb on + strand, within AO356_24995 at 5663.160 kb on - strand, within AO356_24995 at 5663.270 kb on + strand, within AO356_24995 at 5663.477 kb on + strand, within AO356_24995 at 5663.477 kb on + strand, within AO356_24995 at 5663.624 kb on + strand, within AO356_24995 at 5663.694 kb on - strand, within AO356_24995 at 5663.742 kb on + strand, within AO356_24995 at 5663.742 kb on + strand, within AO356_24995 at 5663.742 kb on + strand, within AO356_24995 at 5663.743 kb on - strand, within AO356_24995 at 5663.743 kb on - strand, within AO356_24995 at 5663.777 kb on - strand, within AO356_24995 at 5663.786 kb on + strand at 5663.787 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Mannitol 5 mM remove 5,661,640 + +0.5 5,661,640 + +1.1 5,661,953 - AO356_24985 0.53 -0.1 5,661,953 - AO356_24985 0.53 +0.4 5,662,214 + AO356_24985 0.88 +0.8 5,662,214 + AO356_24985 0.88 -0.1 5,662,215 - AO356_24985 0.88 -0.2 5,662,215 - AO356_24985 0.88 -0.4 5,662,216 + AO356_24985 0.88 +0.2 5,662,217 - AO356_24985 0.88 +0.4 5,662,217 - AO356_24985 0.88 -0.1 5,662,217 - AO356_24985 0.88 +0.3 5,662,217 - AO356_24985 0.88 -0.2 5,662,421 + -0.1 5,662,615 + -0.6 5,662,616 - +0.4 5,662,670 + AO356_24990 0.27 -1.3 5,662,670 + AO356_24990 0.27 +1.2 5,662,882 + +0.4 5,662,882 + -0.1 5,662,882 + +0.4 5,662,882 + +0.8 5,662,882 + -0.7 5,662,883 - -1.0 5,662,883 - -0.1 5,662,886 + -0.3 5,662,887 - +0.5 5,662,889 - -0.6 5,662,986 + -0.3 5,662,986 + +1.9 5,662,986 + +1.0 5,662,986 + +0.6 5,662,986 + +0.2 5,662,986 + -1.1 5,662,987 - +0.6 5,662,987 - +0.4 5,662,987 - -1.1 5,662,987 - -0.1 5,662,987 - -0.2 5,663,159 + AO356_24995 0.23 +0.2 5,663,160 - AO356_24995 0.23 +0.3 5,663,270 + AO356_24995 0.35 -1.2 5,663,477 + AO356_24995 0.57 +1.8 5,663,477 + AO356_24995 0.57 -0.6 5,663,624 + AO356_24995 0.73 -0.6 5,663,694 - AO356_24995 0.81 -0.6 5,663,742 + AO356_24995 0.86 -2.0 5,663,742 + AO356_24995 0.86 -0.3 5,663,742 + AO356_24995 0.86 -1.1 5,663,743 - AO356_24995 0.86 -0.6 5,663,743 - AO356_24995 0.86 +0.3 5,663,777 - AO356_24995 0.90 -0.4 5,663,786 + +0.1 5,663,787 - +0.1
Or see this region's nucleotide sequence