Experiment: Carbon source D-Mannitol 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24725 and AO356_24730 are separated by 155 nucleotides AO356_24730 and AO356_24735 are separated by 205 nucleotides AO356_24735 and AO356_24740 overlap by 4 nucleotides AO356_24740 and AO356_24745 are separated by 37 nucleotides
AO356_24725: AO356_24725 - alkylhydroperoxidase, at 5,595,039 to 5,595,479
_24725
AO356_24730: AO356_24730 - hypothetical protein, at 5,595,635 to 5,595,961
_24730
AO356_24735: AO356_24735 - TonB-dependent outer membrane receptor, at 5,596,167 to 5,596,799
_24735
AO356_24740: AO356_24740 - RNA polymerase subunit sigma-24, at 5,596,796 to 5,597,341
_24740
AO356_24745: AO356_24745 - iron dicitrate transport regulator FecR, at 5,597,379 to 5,598,320
_24745
Position (kb) 5596
5597 Strain fitness (log2 ratio) -1
0
1
2 at 5595.246 kb on + strand, within AO356_24725 at 5595.360 kb on + strand, within AO356_24725 at 5595.360 kb on + strand, within AO356_24725 at 5595.361 kb on - strand, within AO356_24725 at 5595.688 kb on + strand, within AO356_24730 at 5595.689 kb on - strand, within AO356_24730 at 5595.841 kb on - strand, within AO356_24730 at 5595.856 kb on - strand, within AO356_24730 at 5596.014 kb on + strand at 5596.015 kb on - strand at 5596.036 kb on - strand at 5596.401 kb on + strand, within AO356_24735 at 5596.402 kb on - strand, within AO356_24735 at 5596.494 kb on + strand, within AO356_24735 at 5596.531 kb on + strand, within AO356_24735 at 5596.531 kb on + strand, within AO356_24735 at 5596.531 kb on + strand, within AO356_24735 at 5596.532 kb on - strand, within AO356_24735 at 5596.844 kb on + strand at 5596.845 kb on - strand at 5596.920 kb on - strand, within AO356_24740 at 5596.984 kb on + strand, within AO356_24740 at 5597.141 kb on + strand, within AO356_24740 at 5597.142 kb on - strand, within AO356_24740 at 5597.346 kb on - strand at 5597.712 kb on + strand, within AO356_24745 at 5597.712 kb on + strand, within AO356_24745
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Mannitol 5 mM remove 5,595,246 + AO356_24725 0.47 +0.5 5,595,360 + AO356_24725 0.73 -1.2 5,595,360 + AO356_24725 0.73 +0.1 5,595,361 - AO356_24725 0.73 +0.3 5,595,688 + AO356_24730 0.16 +0.2 5,595,689 - AO356_24730 0.17 -0.8 5,595,841 - AO356_24730 0.63 +1.0 5,595,856 - AO356_24730 0.68 +0.8 5,596,014 + +0.3 5,596,015 - +0.2 5,596,036 - +1.0 5,596,401 + AO356_24735 0.37 +0.2 5,596,402 - AO356_24735 0.37 +0.1 5,596,494 + AO356_24735 0.52 +0.8 5,596,531 + AO356_24735 0.58 -1.3 5,596,531 + AO356_24735 0.58 +0.0 5,596,531 + AO356_24735 0.58 +0.2 5,596,532 - AO356_24735 0.58 +0.4 5,596,844 + +0.6 5,596,845 - -0.4 5,596,920 - AO356_24740 0.23 +2.2 5,596,984 + AO356_24740 0.34 -0.7 5,597,141 + AO356_24740 0.63 -0.4 5,597,142 - AO356_24740 0.63 -0.7 5,597,346 - -0.7 5,597,712 + AO356_24745 0.35 -0.1 5,597,712 + AO356_24745 0.35 -0.6
Or see this region's nucleotide sequence