Experiment: Carbon source D-Mannitol 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16050 and AO356_16055 are separated by 327 nucleotides AO356_16055 and AO356_16060 overlap by 4 nucleotides
AO356_16050: AO356_16050 - glucose-6-phosphate isomerase, at 3,629,285 to 3,630,949
_16050
AO356_16055: AO356_16055 - pantoate--beta-alanine ligase, at 3,631,277 to 3,632,137
_16055
AO356_16060: AO356_16060 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 3,632,134 to 3,632,934
_16060
Position (kb)
3631
3632
3633 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3630.578 kb on - strand, within AO356_16050 at 3630.943 kb on - strand at 3630.968 kb on + strand at 3630.987 kb on - strand at 3630.987 kb on - strand at 3631.062 kb on + strand at 3631.062 kb on + strand at 3631.062 kb on + strand at 3631.063 kb on - strand at 3631.067 kb on + strand at 3631.067 kb on + strand at 3631.067 kb on + strand at 3631.067 kb on + strand at 3631.068 kb on - strand at 3631.068 kb on - strand at 3631.068 kb on - strand at 3631.068 kb on - strand at 3631.068 kb on - strand at 3631.068 kb on - strand at 3631.125 kb on + strand at 3631.125 kb on + strand at 3631.126 kb on - strand at 3631.126 kb on - strand at 3632.192 kb on + strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.193 kb on - strand at 3632.487 kb on - strand, within AO356_16060 at 3632.487 kb on - strand, within AO356_16060 at 3632.500 kb on - strand, within AO356_16060 at 3632.500 kb on - strand, within AO356_16060 at 3632.500 kb on - strand, within AO356_16060 at 3632.667 kb on - strand, within AO356_16060 at 3632.735 kb on + strand, within AO356_16060 at 3632.736 kb on - strand, within AO356_16060 at 3632.736 kb on - strand, within AO356_16060 at 3632.736 kb on - strand, within AO356_16060 at 3632.862 kb on - strand at 3632.862 kb on - strand at 3632.862 kb on - strand at 3632.862 kb on - strand at 3632.862 kb on - strand at 3632.926 kb on - strand at 3632.926 kb on - strand at 3632.926 kb on - strand at 3632.926 kb on - strand at 3632.926 kb on - strand at 3632.926 kb on - strand at 3632.926 kb on - strand at 3632.949 kb on + strand at 3632.949 kb on + strand at 3632.991 kb on - strand at 3632.991 kb on - strand at 3632.991 kb on - strand at 3632.994 kb on + strand at 3632.994 kb on + strand at 3632.994 kb on + strand at 3632.994 kb on + strand at 3632.994 kb on + strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.995 kb on - strand at 3632.996 kb on + strand at 3633.011 kb on + strand at 3633.011 kb on + strand at 3633.011 kb on + strand at 3633.012 kb on - strand at 3633.012 kb on - strand at 3633.012 kb on - strand at 3633.012 kb on - strand at 3633.012 kb on - strand at 3633.026 kb on + strand at 3633.026 kb on + strand at 3633.026 kb on + strand at 3633.026 kb on + strand at 3633.026 kb on + strand at 3633.026 kb on + strand at 3633.027 kb on - strand at 3633.027 kb on - strand at 3633.027 kb on - strand at 3633.048 kb on - strand at 3633.048 kb on - strand at 3633.048 kb on - strand at 3633.076 kb on + strand at 3633.076 kb on + strand at 3633.076 kb on + strand at 3633.076 kb on + strand at 3633.076 kb on + strand at 3633.077 kb on - strand at 3633.077 kb on - strand at 3633.077 kb on - strand at 3633.077 kb on - strand at 3633.077 kb on - strand at 3633.078 kb on + strand at 3633.078 kb on + strand at 3633.078 kb on + strand at 3633.079 kb on - strand at 3633.079 kb on - strand at 3633.079 kb on - strand at 3633.079 kb on - strand at 3633.079 kb on - strand at 3633.079 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Mannitol 5 mM remove 3,630,578 - AO356_16050 0.78 -0.8 3,630,943 - -2.5 3,630,968 + -0.8 3,630,987 - -1.1 3,630,987 - -0.0 3,631,062 + -2.7 3,631,062 + -3.7 3,631,062 + -2.8 3,631,063 - -0.8 3,631,067 + -3.2 3,631,067 + -0.8 3,631,067 + -1.4 3,631,067 + -0.7 3,631,068 - -0.5 3,631,068 - +0.6 3,631,068 - -0.5 3,631,068 - +0.4 3,631,068 - +0.9 3,631,068 - +0.6 3,631,125 + -1.4 3,631,125 + -0.5 3,631,126 - -0.5 3,631,126 - +0.6 3,632,192 + +0.8 3,632,193 - +1.8 3,632,193 - -1.1 3,632,193 - -1.2 3,632,193 - -0.1 3,632,193 - -0.9 3,632,193 - +0.9 3,632,193 - -1.1 3,632,193 - +0.5 3,632,193 - -2.0 3,632,487 - AO356_16060 0.44 -2.2 3,632,487 - AO356_16060 0.44 +1.3 3,632,500 - AO356_16060 0.46 -0.8 3,632,500 - AO356_16060 0.46 -0.2 3,632,500 - AO356_16060 0.46 +1.8 3,632,667 - AO356_16060 0.67 +2.4 3,632,735 + AO356_16060 0.75 -1.2 3,632,736 - AO356_16060 0.75 -1.1 3,632,736 - AO356_16060 0.75 -0.1 3,632,736 - AO356_16060 0.75 +0.2 3,632,862 - -1.2 3,632,862 - +0.4 3,632,862 - +1.3 3,632,862 - +1.8 3,632,862 - -1.3 3,632,926 - -0.3 3,632,926 - -0.2 3,632,926 - +0.8 3,632,926 - +0.8 3,632,926 - -0.7 3,632,926 - -1.0 3,632,926 - -0.4 3,632,949 + +1.0 3,632,949 + -0.7 3,632,991 - -0.9 3,632,991 - +0.9 3,632,991 - +0.4 3,632,994 + -2.1 3,632,994 + -0.2 3,632,994 + -0.5 3,632,994 + -1.7 3,632,994 + -1.2 3,632,995 - -0.4 3,632,995 - +1.3 3,632,995 - +0.1 3,632,995 - +0.2 3,632,995 - +0.6 3,632,995 - -0.5 3,632,995 - -0.0 3,632,995 - -1.4 3,632,995 - +0.6 3,632,995 - +0.4 3,632,995 - +0.1 3,632,996 + +3.4 3,633,011 + -0.5 3,633,011 + -1.2 3,633,011 + +0.5 3,633,012 - +1.2 3,633,012 - -0.7 3,633,012 - +0.5 3,633,012 - +0.0 3,633,012 - +0.3 3,633,026 + +0.6 3,633,026 + +0.1 3,633,026 + -1.7 3,633,026 + +0.8 3,633,026 + +0.4 3,633,026 + +0.2 3,633,027 - +1.6 3,633,027 - +0.4 3,633,027 - +2.3 3,633,048 - -2.3 3,633,048 - +0.8 3,633,048 - +1.2 3,633,076 + -0.2 3,633,076 + -1.5 3,633,076 + -0.8 3,633,076 + -0.4 3,633,076 + -1.0 3,633,077 - -1.0 3,633,077 - +0.4 3,633,077 - +0.4 3,633,077 - +1.1 3,633,077 - +0.8 3,633,078 + -1.2 3,633,078 + -2.5 3,633,078 + -2.1 3,633,079 - +0.0 3,633,079 - +0.2 3,633,079 - +0.8 3,633,079 - +0.1 3,633,079 - -0.2 3,633,079 - +0.2
Or see this region's nucleotide sequence