Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23690
Experiment: Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL |
---|---|---|---|---|---|
remove | |||||
4,943,523 | + | BWI76_RS23685 | 0.26 | -0.5 | |
4,943,531 | - | BWI76_RS23685 | 0.27 | -0.5 | |
4,943,531 | - | BWI76_RS23685 | 0.27 | +0.7 | |
4,943,532 | - | BWI76_RS23685 | 0.27 | -0.1 | |
4,943,552 | + | BWI76_RS23685 | 0.29 | -1.1 | |
4,943,619 | - | BWI76_RS23685 | 0.34 | -0.4 | |
4,943,806 | + | BWI76_RS23685 | 0.48 | +1.2 | |
4,944,125 | - | BWI76_RS23685 | 0.72 | -1.5 | |
4,944,176 | + | BWI76_RS23685 | 0.75 | +0.2 | |
4,944,290 | + | BWI76_RS23685 | 0.84 | -2.1 | |
4,944,290 | + | BWI76_RS23685 | 0.84 | +0.5 | |
4,944,298 | - | BWI76_RS23685 | 0.84 | +0.2 | |
4,944,345 | - | BWI76_RS23685 | 0.88 | +0.1 | |
4,944,633 | + | BWI76_RS23690 | 0.33 | -1.2 | |
4,944,682 | + | BWI76_RS23690 | 0.45 | -1.5 | |
4,944,957 | + | -1.4 | |||
4,944,965 | - | -0.3 | |||
4,945,069 | - | +0.2 | |||
4,945,185 | + | +0.3 | |||
4,945,303 | + | BWI76_RS23695 | 0.10 | -0.4 | |
4,945,323 | - | BWI76_RS23695 | 0.11 | -0.5 | |
4,945,347 | - | BWI76_RS23695 | 0.13 | +0.9 | |
4,945,423 | + | BWI76_RS23695 | 0.18 | -0.1 | |
4,945,424 | - | BWI76_RS23695 | 0.18 | -1.2 | |
4,945,493 | + | BWI76_RS23695 | 0.22 | -0.1 | |
4,945,501 | - | BWI76_RS23695 | 0.23 | +1.3 | |
4,945,734 | + | BWI76_RS23695 | 0.38 | +0.2 |
Or see this region's nucleotide sequence