Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20840
Experiment: Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL |
---|---|---|---|---|---|
remove | |||||
4,355,134 | - | BWI76_RS20835 | 0.53 | +1.7 | |
4,355,239 | - | BWI76_RS20835 | 0.58 | +0.6 | |
4,355,378 | - | BWI76_RS20835 | 0.65 | -2.8 | |
4,355,450 | + | BWI76_RS20835 | 0.69 | -0.7 | |
4,355,603 | + | BWI76_RS20835 | 0.76 | -2.7 | |
4,355,803 | - | BWI76_RS20835 | 0.86 | +0.8 | |
4,355,803 | - | BWI76_RS20835 | 0.86 | +1.4 | |
4,355,858 | - | BWI76_RS20835 | 0.89 | +0.4 | |
4,356,071 | - | +0.6 | |||
4,356,080 | - | +0.8 | |||
4,356,279 | + | BWI76_RS20840 | 0.22 | +0.4 | |
4,356,306 | + | BWI76_RS20840 | 0.24 | +2.7 | |
4,356,337 | - | BWI76_RS20840 | 0.27 | +0.7 | |
4,356,674 | + | BWI76_RS20840 | 0.59 | +1.0 | |
4,356,719 | + | BWI76_RS20840 | 0.63 | +1.1 | |
4,356,742 | - | BWI76_RS20840 | 0.65 | +1.6 | |
4,356,930 | + | BWI76_RS20840 | 0.83 | -0.4 | |
4,357,582 | - | BWI76_RS20845 | 0.67 | +0.3 | |
4,357,656 | - | BWI76_RS20845 | 0.79 | -0.5 | |
4,357,656 | - | BWI76_RS20845 | 0.79 | -0.6 | |
4,357,807 | + | +0.9 | |||
4,357,834 | - | -0.2 |
Or see this region's nucleotide sequence