Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19200
Experiment: Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL |
---|---|---|---|---|---|
remove | |||||
3,995,398 | - | -2.1 | |||
3,995,504 | + | +1.6 | |||
3,995,621 | + | BWI76_RS19195 | 0.19 | +1.9 | |
3,995,880 | - | BWI76_RS19195 | 0.50 | -0.1 | |
3,995,929 | + | BWI76_RS19195 | 0.55 | +0.9 | |
3,996,076 | - | BWI76_RS19195 | 0.73 | +1.4 | |
3,996,078 | - | BWI76_RS19195 | 0.73 | +0.8 | |
3,996,374 | + | +0.4 | |||
3,996,433 | + | BWI76_RS19200 | 0.14 | -1.4 | |
3,996,586 | + | BWI76_RS19200 | 0.30 | -1.3 | |
3,996,654 | + | BWI76_RS19200 | 0.37 | -0.8 | |
3,996,968 | + | BWI76_RS19200 | 0.71 | +0.2 | |
3,997,091 | - | BWI76_RS19200 | 0.84 | -2.7 | |
3,997,807 | + | BWI76_RS19205 | 0.63 | -2.3 | |
3,997,906 | + | BWI76_RS19205 | 0.74 | -0.7 | |
3,997,948 | + | BWI76_RS19205 | 0.79 | +0.2 | |
3,998,075 | + | -0.1 |
Or see this region's nucleotide sequence