Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16835
Experiment: Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL |
---|---|---|---|---|---|
remove | |||||
3,489,236 | + | BWI76_RS16830 | 0.31 | +0.2 | |
3,489,349 | + | BWI76_RS16830 | 0.45 | +0.8 | |
3,489,441 | + | BWI76_RS16830 | 0.56 | +0.5 | |
3,489,450 | + | BWI76_RS16830 | 0.57 | -0.9 | |
3,489,461 | + | BWI76_RS16830 | 0.59 | +1.7 | |
3,490,065 | + | -1.1 | |||
3,490,120 | + | -1.7 | |||
3,490,384 | - | +0.7 | |||
3,490,669 | - | BWI76_RS16835 | 0.21 | +0.5 | |
3,490,956 | - | BWI76_RS16835 | 0.34 | -0.1 | |
3,491,319 | - | BWI76_RS16835 | 0.51 | +1.2 | |
3,491,376 | + | BWI76_RS16835 | 0.53 | +0.5 | |
3,491,436 | + | BWI76_RS16835 | 0.56 | +0.5 | |
3,491,448 | + | BWI76_RS16835 | 0.57 | +0.5 | |
3,491,591 | + | BWI76_RS16835 | 0.63 | -0.1 | |
3,491,597 | - | BWI76_RS16835 | 0.64 | -0.5 | |
3,491,789 | + | BWI76_RS16835 | 0.73 | +0.9 | |
3,491,808 | + | BWI76_RS16835 | 0.73 | +0.4 | |
3,491,847 | + | BWI76_RS16835 | 0.75 | -0.9 | |
3,491,871 | + | BWI76_RS16835 | 0.76 | +0.6 | |
3,492,086 | + | BWI76_RS16835 | 0.86 | +0.6 | |
3,492,127 | - | BWI76_RS16835 | 0.88 | +0.1 | |
3,492,297 | - | +4.2 | |||
3,492,470 | + | +1.8 | |||
3,492,531 | + | +0.3 | |||
3,492,735 | - | BWI76_RS16840 | 0.20 | +0.3 | |
3,492,765 | + | BWI76_RS16840 | 0.24 | -0.1 | |
3,493,165 | - | BWI76_RS16840 | 0.75 | +1.7 |
Or see this region's nucleotide sequence