Experiment: Carbon source D-Mannitol 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27660 and AO356_27665 are separated by 70 nucleotides AO356_27665 and AO356_27670 are separated by 345 nucleotides
AO356_27660: AO356_27660 - glycosyltransferase, at 6,314,448 to 6,315,731
_27660
AO356_27665: AO356_27665 - AraC family transcriptional regulator, at 6,315,802 to 6,316,707
_27665
AO356_27670: AO356_27670 - sugar ABC transporter substrate-binding protein, at 6,317,053 to 6,318,363
_27670
Position (kb)
6315
6316
6317 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 6315.210 kb on + strand, within AO356_27660 at 6315.219 kb on + strand, within AO356_27660 at 6315.220 kb on - strand, within AO356_27660 at 6315.222 kb on - strand, within AO356_27660 at 6315.498 kb on + strand, within AO356_27660 at 6315.498 kb on + strand, within AO356_27660 at 6315.498 kb on + strand, within AO356_27660 at 6315.499 kb on - strand, within AO356_27660 at 6315.499 kb on - strand, within AO356_27660 at 6315.499 kb on - strand, within AO356_27660 at 6315.499 kb on - strand, within AO356_27660 at 6315.500 kb on + strand, within AO356_27660 at 6315.690 kb on + strand at 6315.690 kb on + strand at 6315.690 kb on + strand at 6315.690 kb on + strand at 6315.690 kb on + strand at 6315.690 kb on + strand at 6315.690 kb on + strand at 6315.691 kb on - strand at 6315.691 kb on - strand at 6315.835 kb on + strand at 6315.835 kb on + strand at 6315.835 kb on + strand at 6315.929 kb on - strand, within AO356_27665 at 6315.980 kb on - strand, within AO356_27665 at 6315.980 kb on - strand, within AO356_27665 at 6315.980 kb on - strand, within AO356_27665 at 6315.980 kb on - strand, within AO356_27665 at 6315.995 kb on - strand, within AO356_27665 at 6315.995 kb on - strand, within AO356_27665 at 6316.312 kb on + strand, within AO356_27665 at 6316.313 kb on - strand, within AO356_27665 at 6316.463 kb on - strand, within AO356_27665 at 6316.463 kb on - strand, within AO356_27665 at 6316.892 kb on + strand at 6316.921 kb on - strand at 6316.921 kb on - strand at 6317.009 kb on + strand at 6317.009 kb on + strand at 6317.010 kb on - strand at 6317.010 kb on - strand at 6317.010 kb on - strand at 6317.103 kb on + strand at 6317.314 kb on + strand, within AO356_27670 at 6317.437 kb on + strand, within AO356_27670 at 6317.438 kb on - strand, within AO356_27670 at 6317.438 kb on - strand, within AO356_27670 at 6317.473 kb on + strand, within AO356_27670 at 6317.474 kb on - strand, within AO356_27670 at 6317.474 kb on - strand, within AO356_27670 at 6317.584 kb on + strand, within AO356_27670
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Mannitol 10 mM remove 6,315,210 + AO356_27660 0.59 -0.4 6,315,219 + AO356_27660 0.60 -0.0 6,315,220 - AO356_27660 0.60 +0.6 6,315,222 - AO356_27660 0.60 +1.6 6,315,498 + AO356_27660 0.82 +0.2 6,315,498 + AO356_27660 0.82 +0.2 6,315,498 + AO356_27660 0.82 -0.6 6,315,499 - AO356_27660 0.82 +0.5 6,315,499 - AO356_27660 0.82 +1.2 6,315,499 - AO356_27660 0.82 -0.2 6,315,499 - AO356_27660 0.82 +0.8 6,315,500 + AO356_27660 0.82 +1.0 6,315,690 + +0.6 6,315,690 + +0.7 6,315,690 + +0.4 6,315,690 + -0.9 6,315,690 + +1.0 6,315,690 + +1.2 6,315,690 + +0.6 6,315,691 - -1.8 6,315,691 - -0.3 6,315,835 + -2.5 6,315,835 + -4.1 6,315,835 + -1.7 6,315,929 - AO356_27665 0.14 -2.0 6,315,980 - AO356_27665 0.20 -2.6 6,315,980 - AO356_27665 0.20 -3.2 6,315,980 - AO356_27665 0.20 -2.3 6,315,980 - AO356_27665 0.20 -3.5 6,315,995 - AO356_27665 0.21 -0.9 6,315,995 - AO356_27665 0.21 -2.9 6,316,312 + AO356_27665 0.56 -2.3 6,316,313 - AO356_27665 0.56 -3.3 6,316,463 - AO356_27665 0.73 -3.3 6,316,463 - AO356_27665 0.73 -1.3 6,316,892 + +0.2 6,316,921 - -1.3 6,316,921 - -2.3 6,317,009 + -2.0 6,317,009 + -2.5 6,317,010 - -1.7 6,317,010 - -2.0 6,317,010 - -2.0 6,317,103 + -3.2 6,317,314 + AO356_27670 0.20 -1.6 6,317,437 + AO356_27670 0.29 -2.7 6,317,438 - AO356_27670 0.29 -2.5 6,317,438 - AO356_27670 0.29 -2.0 6,317,473 + AO356_27670 0.32 -2.4 6,317,474 - AO356_27670 0.32 -2.7 6,317,474 - AO356_27670 0.32 -3.1 6,317,584 + AO356_27670 0.41 -0.8
Or see this region's nucleotide sequence