Experiment: Ferric citrate electron acceptor; flight
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO3258 and tRNA-Arg-9 are separated by 55 nucleotides tRNA-Arg-9 and SO3259 are separated by 47 nucleotides
SO3258: SO3258 - conserved hypothetical protein (NCBI ptt file), at 3,393,912 to 3,395,087
SO3258
SO_t078: tRNA-Arg-9 - tRNA-Arg (RefSeq), at 3,395,143 to 3,395,218
tRNA-Arg-9
SO3259: SO3259 - conserved domain protein (NCBI ptt file), at 3,395,266 to 3,396,591
SO3259
Position (kb) 3395
3396 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 3394.150 kb on + strand, within SO3258 at 3394.244 kb on + strand, within SO3258 at 3394.245 kb on - strand, within SO3258 at 3394.283 kb on + strand, within SO3258 at 3394.283 kb on + strand, within SO3258 at 3394.311 kb on + strand, within SO3258 at 3394.332 kb on + strand, within SO3258 at 3394.332 kb on + strand, within SO3258 at 3394.340 kb on - strand, within SO3258 at 3394.340 kb on - strand, within SO3258 at 3394.340 kb on - strand, within SO3258 at 3394.340 kb on - strand, within SO3258 at 3394.424 kb on - strand, within SO3258 at 3394.445 kb on + strand, within SO3258 at 3394.495 kb on - strand, within SO3258 at 3394.561 kb on + strand, within SO3258 at 3394.571 kb on + strand, within SO3258 at 3394.664 kb on + strand, within SO3258 at 3394.667 kb on - strand, within SO3258 at 3394.717 kb on - strand, within SO3258 at 3394.747 kb on + strand, within SO3258 at 3394.836 kb on + strand, within SO3258 at 3394.844 kb on - strand, within SO3258 at 3394.892 kb on - strand, within SO3258 at 3395.012 kb on + strand at 3395.054 kb on - strand at 3395.160 kb on + strand, within tRNA-Arg-9 at 3395.160 kb on + strand, within tRNA-Arg-9 at 3395.168 kb on - strand, within tRNA-Arg-9 at 3395.168 kb on - strand, within tRNA-Arg-9 at 3395.168 kb on - strand, within tRNA-Arg-9 at 3395.371 kb on + strand at 3395.371 kb on + strand at 3395.379 kb on - strand at 3395.412 kb on + strand, within SO3259 at 3395.503 kb on + strand, within SO3259 at 3395.668 kb on - strand, within SO3259 at 3395.832 kb on - strand, within SO3259 at 3395.911 kb on - strand, within SO3259 at 3395.911 kb on - strand, within SO3259 at 3395.911 kb on - strand, within SO3259 at 3395.959 kb on - strand, within SO3259 at 3395.993 kb on - strand, within SO3259 at 3396.018 kb on + strand, within SO3259 at 3396.018 kb on + strand, within SO3259 at 3396.026 kb on - strand, within SO3259 at 3396.026 kb on - strand, within SO3259 at 3396.130 kb on + strand, within SO3259 at 3396.130 kb on + strand, within SO3259 at 3396.130 kb on + strand, within SO3259 at 3396.130 kb on + strand, within SO3259 at 3396.138 kb on - strand, within SO3259 at 3396.138 kb on - strand, within SO3259 at 3396.138 kb on - strand, within SO3259 at 3396.138 kb on - strand, within SO3259 at 3396.138 kb on - strand, within SO3259 at 3396.212 kb on + strand, within SO3259
Per-strain Table
Position Strand Gene LocusTag Fraction Ferric citrate electron acceptor; flight remove 3,394,150 + SO3258 0.20 -3.2 3,394,244 + SO3258 0.28 -0.9 3,394,245 - SO3258 0.28 -1.0 3,394,283 + SO3258 0.32 -1.5 3,394,283 + SO3258 0.32 -1.9 3,394,311 + SO3258 0.34 -0.9 3,394,332 + SO3258 0.36 +0.2 3,394,332 + SO3258 0.36 -1.5 3,394,340 - SO3258 0.36 -1.4 3,394,340 - SO3258 0.36 -2.3 3,394,340 - SO3258 0.36 +1.6 3,394,340 - SO3258 0.36 -2.6 3,394,424 - SO3258 0.44 -1.6 3,394,445 + SO3258 0.45 -2.2 3,394,495 - SO3258 0.50 -2.9 3,394,561 + SO3258 0.55 -1.7 3,394,571 + SO3258 0.56 -1.0 3,394,664 + SO3258 0.64 -0.3 3,394,667 - SO3258 0.64 -0.9 3,394,717 - SO3258 0.68 +0.6 3,394,747 + SO3258 0.71 -1.6 3,394,836 + SO3258 0.79 -0.8 3,394,844 - SO3258 0.79 -0.2 3,394,892 - SO3258 0.83 -0.9 3,395,012 + -1.4 3,395,054 - -2.6 3,395,160 + tRNA-Arg-9 SO_t078 0.22 -2.4 3,395,160 + tRNA-Arg-9 SO_t078 0.22 -0.3 3,395,168 - tRNA-Arg-9 SO_t078 0.33 +0.9 3,395,168 - tRNA-Arg-9 SO_t078 0.33 -2.9 3,395,168 - tRNA-Arg-9 SO_t078 0.33 -1.6 3,395,371 + -3.4 3,395,371 + -3.9 3,395,379 - -0.2 3,395,412 + SO3259 0.11 -2.8 3,395,503 + SO3259 0.18 -0.8 3,395,668 - SO3259 0.30 -1.6 3,395,832 - SO3259 0.43 +0.2 3,395,911 - SO3259 0.49 +0.4 3,395,911 - SO3259 0.49 -2.5 3,395,911 - SO3259 0.49 +0.6 3,395,959 - SO3259 0.52 +1.9 3,395,993 - SO3259 0.55 -0.4 3,396,018 + SO3259 0.57 +1.5 3,396,018 + SO3259 0.57 -2.1 3,396,026 - SO3259 0.57 -0.9 3,396,026 - SO3259 0.57 -0.7 3,396,130 + SO3259 0.65 -1.6 3,396,130 + SO3259 0.65 -0.6 3,396,130 + SO3259 0.65 +0.1 3,396,130 + SO3259 0.65 -1.8 3,396,138 - SO3259 0.66 +0.3 3,396,138 - SO3259 0.66 -2.2 3,396,138 - SO3259 0.66 -1.8 3,396,138 - SO3259 0.66 -1.0 3,396,138 - SO3259 0.66 -0.5 3,396,212 + SO3259 0.71 -0.8
Or see this region's nucleotide sequence