Experiment: Ferric citrate electron acceptor; flight
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO2498 and SO2499 are separated by 43 nucleotides SO2499 and SO2500 are separated by 163 nucleotides SO2500 and tRNA-Tyr-4 are separated by 125 nucleotides tRNA-Tyr-4 and tRNA-Tyr-3 are separated by 39 nucleotides
SO2498: SO2498 - sensory box protein (NCBI ptt file), at 2,623,052 to 2,625,379
SO2498
SO2499: SO2499 - conserved hypothetical protein (NCBI ptt file), at 2,625,423 to 2,625,710
SO2499
SO2500: SO2500 - conserved hypothetical protein (NCBI ptt file), at 2,625,874 to 2,626,362
SO2500
SO_t045: tRNA-Tyr-4 - tRNA-Tyr (RefSeq), at 2,626,488 to 2,626,572
tRNA-Tyr-4
SO_t046: tRNA-Tyr-3 - tRNA-Tyr (RefSeq), at 2,626,612 to 2,626,696
tRNA-Tyr-3
Position (kb)
2625
2626 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2624.583 kb on + strand, within SO2498 at 2624.583 kb on + strand, within SO2498 at 2624.583 kb on + strand, within SO2498 at 2624.583 kb on + strand, within SO2498 at 2624.583 kb on + strand, within SO2498 at 2624.755 kb on - strand, within SO2498 at 2624.822 kb on - strand, within SO2498 at 2624.824 kb on + strand, within SO2498 at 2624.824 kb on + strand, within SO2498 at 2624.872 kb on + strand, within SO2498 at 2624.880 kb on - strand, within SO2498 at 2624.945 kb on + strand, within SO2498 at 2624.953 kb on - strand, within SO2498 at 2625.013 kb on + strand, within SO2498 at 2625.301 kb on + strand at 2625.309 kb on - strand at 2625.494 kb on - strand, within SO2499 at 2625.496 kb on + strand, within SO2499 at 2625.547 kb on + strand, within SO2499 at 2625.550 kb on - strand, within SO2499 at 2625.712 kb on + strand at 2625.817 kb on - strand at 2625.858 kb on + strand at 2625.881 kb on - strand at 2625.883 kb on + strand at 2625.883 kb on + strand at 2625.980 kb on - strand, within SO2500 at 2625.983 kb on + strand, within SO2500 at 2625.999 kb on - strand, within SO2500 at 2626.000 kb on + strand, within SO2500 at 2626.064 kb on + strand, within SO2500
Per-strain Table
Position Strand Gene LocusTag Fraction Ferric citrate electron acceptor; flight remove 2,624,583 + SO2498 0.66 -0.6 2,624,583 + SO2498 0.66 -2.5 2,624,583 + SO2498 0.66 -0.5 2,624,583 + SO2498 0.66 -1.2 2,624,583 + SO2498 0.66 +0.3 2,624,755 - SO2498 0.73 -1.7 2,624,822 - SO2498 0.76 -2.0 2,624,824 + SO2498 0.76 -1.5 2,624,824 + SO2498 0.76 +1.6 2,624,872 + SO2498 0.78 -0.1 2,624,880 - SO2498 0.79 -0.2 2,624,945 + SO2498 0.81 +1.3 2,624,953 - SO2498 0.82 -0.1 2,625,013 + SO2498 0.84 -0.5 2,625,301 + +4.2 2,625,309 - -1.2 2,625,494 - SO2499 0.25 -1.4 2,625,496 + SO2499 0.25 -1.1 2,625,547 + SO2499 0.43 -1.1 2,625,550 - SO2499 0.44 -0.5 2,625,712 + -1.2 2,625,817 - -1.0 2,625,858 + -2.7 2,625,881 - +0.4 2,625,883 + -2.5 2,625,883 + +0.4 2,625,980 - SO2500 0.22 -0.5 2,625,983 + SO2500 0.22 +0.7 2,625,999 - SO2500 0.26 +1.6 2,626,000 + SO2500 0.26 -0.8 2,626,064 + SO2500 0.39 -1.0
Or see this region's nucleotide sequence