Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS25740

Experiment: Glucose (C) and Betaine (N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Betaine (N); with MOPS; with chloride
5,746,721	+		PFLU_RS25735	0.90	+0.3
5,746,721	+		PFLU_RS25735	0.90	-1.5
5,746,722	-		PFLU_RS25735	0.90	-0.7
5,746,722	-		PFLU_RS25735	0.90	+0.3
5,746,756	+				-0.9
5,746,756	+				-0.1
5,746,756	+				+0.3
5,746,756	+				+0.9
5,746,757	-				-0.7
5,746,757	-				-0.7
5,746,757	-				+0.3
5,746,757	-				+1.3
5,746,757	-				+0.3
5,746,757	-				+1.9
5,746,757	-				-0.9
5,746,831	+				+2.3
5,746,888	+				-1.5
5,746,888	+				-0.7
5,746,888	+				-0.4
5,746,888	+				+1.9
5,746,889	-				+1.2
5,746,889	-				-1.9
5,746,889	-				-0.7
5,746,950	+				-0.4
5,746,950	+				-0.4
5,746,950	+				+0.0
5,746,951	-				-1.3
5,747,051	+				+0.6
5,747,051	+				+0.7
5,747,051	+				-0.1
5,747,051	+				+0.3
5,747,052	-				+1.1
5,747,052	-				-0.5
5,747,052	-				-0.5
5,747,052	-				+1.3
5,747,052	-				-0.7
5,747,052	-				-0.5
5,747,052	-				-0.1
5,747,053	+				-1.1
5,747,053	+				-0.5
5,747,053	+				-0.5
5,747,053	+				+1.9
5,747,054	-				-0.7
5,747,059	+				+0.1
5,747,059	+				-1.8
5,747,059	+				-0.6
5,747,059	+				-1.1
5,747,059	+				-0.6
5,747,059	+				-0.6
5,747,059	+				-2.0
5,747,059	+				-0.2
5,747,060	-				+0.1
5,747,060	-				+0.7
5,747,062	+				-0.7
5,747,062	+				+0.3
5,747,062	+				-0.6
5,747,063	-				+0.9
5,747,074	-				+1.5
5,747,074	-				-0.4
5,747,074	-				+0.5
5,747,085	+				+0.7
5,747,085	+				+0.9
5,747,085	+				+0.3
5,747,085	+				+0.8
5,747,085	+				+0.1
5,747,085	+				+0.1
5,747,085	+				+0.3
5,747,086	-				-0.5
5,747,086	-				-0.7
5,747,086	-				-0.6
5,747,086	-				-1.9
5,747,095	+				-0.6
5,747,095	+				-0.5
5,747,096	-				-0.5
5,747,101	+				-0.4
5,747,122	+				-2.1
5,747,122	+				-0.3
5,747,122	+				+0.8
5,747,151	+				+1.8
5,747,151	+				+0.3
5,747,151	+				-0.4
5,747,151	+				-1.5
5,747,151	+				-0.6
5,747,151	+				+0.3
5,747,151	+				+0.9
5,747,152	-				+0.7
5,747,152	-				+0.0
5,747,152	-				-1.5
5,747,152	-				-0.6
5,747,152	-				+0.4
5,747,226	-				+0.2
5,747,226	-				-0.7
5,747,253	+				+0.2
5,747,253	+				-0.3
5,747,253	+				+0.3
5,747,253	+				-0.8
5,747,253	+				+0.0
5,747,254	-				-0.3
5,747,254	-				-1.7
5,747,254	-				-0.1
5,747,254	-				+0.0
5,747,254	-				-1.1
5,747,254	-				+0.3
5,747,371	+		PFLU_RS31095	0.22	-1.5
5,747,371	+		PFLU_RS31095	0.22	+0.3
5,747,372	-		PFLU_RS31095	0.23	+0.9
5,747,375	-		PFLU_RS31095	0.24	-0.3
5,747,381	-		PFLU_RS31095	0.27	-2.6
5,747,381	-		PFLU_RS31095	0.27	+0.8
5,747,393	+		PFLU_RS31095	0.34	+1.7
5,747,393	+		PFLU_RS31095	0.34	-1.3
5,747,393	+		PFLU_RS31095	0.34	-0.4
5,747,393	+		PFLU_RS31095	0.34	+0.9
5,747,393	+		PFLU_RS31095	0.34	+0.6
5,747,393	+		PFLU_RS31095	0.34	-0.4
5,747,393	+		PFLU_RS31095	0.34	-1.4
5,747,393	+		PFLU_RS31095	0.34	-0.5
5,747,393	+		PFLU_RS31095	0.34	-2.3
5,747,393	+		PFLU_RS31095	0.34	+0.6
5,747,394	-		PFLU_RS31095	0.34	-0.3
5,747,394	-		PFLU_RS31095	0.34	+0.3
5,747,394	-		PFLU_RS31095	0.34	-1.3
5,747,394	-		PFLU_RS31095	0.34	-1.0
5,747,394	-		PFLU_RS31095	0.34	+0.3
5,747,394	-		PFLU_RS31095	0.34	-0.5
5,747,394	-		PFLU_RS31095	0.34	-1.9
5,747,394	-		PFLU_RS31095	0.34	+1.3
5,747,422	+		PFLU_RS31095	0.49	-1.7
5,747,422	+		PFLU_RS31095	0.49	-0.0
5,747,422	+		PFLU_RS31095	0.49	+1.3
5,747,422	+		PFLU_RS31095	0.49	+1.1
5,747,422	+		PFLU_RS31095	0.49	-0.7
5,747,422	+		PFLU_RS31095	0.49	+2.2
5,747,422	+		PFLU_RS31095	0.49	-1.1
5,747,422	+		PFLU_RS31095	0.49	-0.7
5,747,422	+		PFLU_RS31095	0.49	-0.4
5,747,423	-		PFLU_RS31095	0.50	-0.8
5,747,423	-		PFLU_RS31095	0.50	+1.7
5,747,423	-		PFLU_RS31095	0.50	-0.9
5,747,423	-		PFLU_RS31095	0.50	-0.2
5,747,423	-		PFLU_RS31095	0.50	+0.3
5,747,423	-		PFLU_RS31095	0.50	+0.2
5,747,456	-		PFLU_RS31095	0.68	+0.9
5,747,463	+		PFLU_RS31095	0.72	-0.7
5,747,464	-		PFLU_RS31095	0.72	-0.2
5,747,479	+		PFLU_RS31095	0.80	-0.3
5,747,480	-		PFLU_RS31095	0.81	-0.7
5,747,480	-		PFLU_RS31095	0.81	-2.0
5,747,480	-		PFLU_RS31095	0.81	+0.4
5,747,480	-		PFLU_RS31095	0.81	-0.8
5,747,480	-		PFLU_RS31095	0.81	+0.9
5,747,480	-		PFLU_RS31095	0.81	-0.2
5,747,480	-		PFLU_RS31095	0.81	+0.7
5,747,480	-		PFLU_RS31095	0.81	-1.7
5,747,480	-		PFLU_RS31095	0.81	-1.3
5,747,480	-		PFLU_RS31095	0.81	-1.7
5,747,480	-		PFLU_RS31095	0.81	-0.4
5,747,490	+		PFLU_RS31095	0.86	-1.8
5,747,490	+		PFLU_RS31095	0.86	+1.4
5,747,491	-		PFLU_RS31095	0.87	+0.9
5,747,491	-		PFLU_RS31095	0.87	-0.6
5,747,506	+				+0.8
5,747,506	+				+0.3
5,747,506	+				+0.9
5,747,507	-				+0.8
5,747,507	-				+1.5
5,747,507	-				-0.4
5,747,507	-				+1.2
5,747,513	+				+2.2
5,747,513	+				-1.1
5,747,513	+				+0.7
5,747,513	+				+0.2
5,747,513	+				-0.2
5,747,513	+				+0.9
5,747,514	-				+0.9
5,747,514	-				-0.5
5,747,514	-				+0.1
5,747,624	+				-0.1
5,747,624	+				-1.1
5,747,624	+				-2.5
5,747,625	-				-0.9
5,747,625	-				-0.9
5,747,748	+		PFLU_RS25740	0.12	-0.9
5,747,748	+		PFLU_RS25740	0.12	+1.9
5,747,748	+		PFLU_RS25740	0.12	+0.9
5,747,749	-		PFLU_RS25740	0.12	+0.3
5,747,749	-		PFLU_RS25740	0.12	+0.3
5,747,786	+		PFLU_RS25740	0.15	+1.5
5,747,786	+		PFLU_RS25740	0.15	-0.4
5,747,822	+		PFLU_RS25740	0.17	-0.1
5,747,836	+		PFLU_RS25740	0.18	-0.1
5,747,836	+		PFLU_RS25740	0.18	-0.4
5,747,837	-		PFLU_RS25740	0.18	-0.9
5,747,861	+		PFLU_RS25740	0.20	-0.1
5,747,861	+		PFLU_RS25740	0.20	-0.4
5,747,999	+		PFLU_RS25740	0.30	-1.4
5,747,999	+		PFLU_RS25740	0.30	-1.5
5,748,018	+		PFLU_RS25740	0.31	+0.3
5,748,072	+		PFLU_RS25740	0.35	+0.3
5,748,072	+		PFLU_RS25740	0.35	-2.1
5,748,072	+		PFLU_RS25740	0.35	+0.9
5,748,072	+		PFLU_RS25740	0.35	-1.1
5,748,072	+		PFLU_RS25740	0.35	-0.7
5,748,072	+		PFLU_RS25740	0.35	-2.0
5,748,075	+		PFLU_RS25740	0.35	-0.7
5,748,075	+		PFLU_RS25740	0.35	-0.1
5,748,075	+		PFLU_RS25740	0.35	-0.1
5,748,075	+		PFLU_RS25740	0.35	+0.3
5,748,075	+		PFLU_RS25740	0.35	-1.4
5,748,119	-		PFLU_RS25740	0.38	-1.7
5,748,119	-		PFLU_RS25740	0.38	+0.9
5,748,420	+		PFLU_RS25740	0.60	+0.3
5,748,420	+		PFLU_RS25740	0.60	-0.5
5,748,420	+		PFLU_RS25740	0.60	+0.2
5,748,432	+		PFLU_RS25740	0.61	+0.3
5,748,432	+		PFLU_RS25740	0.61	-0.4
5,748,432	+		PFLU_RS25740	0.61	+0.5
5,748,432	+		PFLU_RS25740	0.61	+0.3
5,748,432	+		PFLU_RS25740	0.61	-1.1
5,748,432	+		PFLU_RS25740	0.61	-0.1
5,748,432	+		PFLU_RS25740	0.61	-1.4
5,748,763	-		PFLU_RS25740	0.84	+2.9
5,748,763	-		PFLU_RS25740	0.84	-0.7
5,748,763	-		PFLU_RS25740	0.84	-0.3
5,748,831	+		PFLU_RS25740	0.89	+0.9
5,748,832	-		PFLU_RS25740	0.89	+0.3
5,748,932	+				-1.7
5,748,981	+				-1.1
5,748,982	-				-1.3
5,748,998	+				-0.5
5,749,541	+				+0.3
5,749,541	+				+0.2
5,749,541	+				-0.0
5,749,542	-				+1.3
5,749,551	-				+0.4
5,749,564	+				-0.1
5,749,564	+				+0.2
5,749,564	+				-1.2
5,749,565	-				+0.6
5,749,565	-				-0.1
5,749,565	-				-0.8
5,749,565	-				+0.9
5,749,565	-				+0.1
5,749,613	+				-0.2
5,749,613	+				-1.5
5,749,613	+				-0.9
5,749,613	+				+0.3
5,749,613	+				-0.2
5,749,613	+				+0.5
5,749,613	+				+0.9
5,749,613	+				+1.9
5,749,613	+				+0.5
5,749,614	-				-0.5
5,749,614	-				+1.0
5,749,614	-				-1.1
5,749,614	-				-0.6
5,749,614	-				+1.9
5,749,614	-				-0.7
5,749,614	-				+1.2
5,749,614	-				-1.9
5,749,615	+				+0.5
5,749,615	+				+0.4
5,749,615	+				-0.0
5,749,615	+				-0.0
5,749,615	+				+0.2
5,749,615	+				-1.5
5,749,616	-				+1.0
5,749,616	-				+0.7
5,749,616	-				+0.3
5,749,616	-				+0.9
5,749,616	-				-0.2
5,749,616	-				-1.9
5,749,616	-				+0.6
5,749,665	+				+0.1
5,749,665	+				-0.6
5,749,665	+				-0.0
5,749,665	+				+0.7
5,749,665	+				+0.3
5,749,665	+				+0.1
5,749,665	+				-1.8
5,749,665	+				-0.2
5,749,665	+				+0.2
5,749,665	+				-0.2
5,749,665	+				-0.9
5,749,665	+				-0.1
5,749,665	+				-0.7
5,749,665	+				+0.7
5,749,666	-				-2.5
5,749,666	-				-1.5
5,749,666	-				+1.3
5,749,666	-				+1.9
5,749,666	-				-0.2
5,749,666	-				-1.1
5,749,666	-				-1.8
5,749,666	-				+0.9
5,749,666	-				-0.5
5,749,666	-				+0.7
5,749,666	-				+0.2
5,749,666	-				-0.7
5,749,666	-				+0.9
5,749,666	-				-0.1
5,749,667	+				+0.0
5,749,667	+				+2.3
5,749,667	+				-1.2
5,749,667	+				+0.3
5,749,667	+				+0.2
5,749,667	+				-1.0
5,749,667	+				+1.1
5,749,667	+				-1.5
5,749,667	+				-0.7
5,749,667	+				-0.4
5,749,667	+				+0.9
5,749,667	+				+1.5
5,749,667	+				+1.2
5,749,667	+				+0.5
5,749,667	+				+1.0
5,749,667	+				-0.3
5,749,667	+				+1.1
5,749,667	+				+1.0
5,749,667	+				-0.1
5,749,667	+				+0.1
5,749,667	+				+0.9
5,749,667	+				-1.7
5,749,667	+				+0.1
5,749,667	+				-0.4
5,749,668	-				-0.1
5,749,668	-				-1.8
5,749,668	-				+0.2
5,749,668	-				-1.0
5,749,668	-				+1.7
5,749,668	-				-0.9
5,749,668	-				+0.8
5,749,668	-				+2.3
5,749,668	-				-0.5
5,749,668	-				-0.2
5,749,668	-				+0.6
5,749,668	-				-0.2
5,749,668	-				-1.1
5,749,668	-				+0.0
5,749,668	-				-3.2
5,749,668	-				-0.1
5,749,668	-				+2.3
5,749,668	-				-0.5
5,749,668	-				-1.5
5,749,668	-				+1.2
5,749,668	-				-0.4
5,749,668	-				+0.7
5,749,668	-				-0.2
5,749,668	-				-0.5
5,749,668	-				-0.9
5,749,668	-				+0.1
5,749,668	-				-1.7
5,749,668	-				-0.9
5,749,696	+				-3.3
5,749,696	+				+1.8
5,749,697	-				+0.4
5,749,698	+				+0.1
5,749,699	-				+0.1
5,749,699	-				+0.9
5,749,769	+				+2.2
5,749,830	+				-0.1
5,749,830	+				+0.3
5,749,830	+				+1.9
5,749,830	+				-0.1
5,749,830	+				-0.2
5,749,830	+				+0.5
5,749,830	+				+0.9
5,749,831	-				+1.9
5,749,831	-				+0.9
5,749,831	-				+0.9
5,749,831	-				+1.9
5,749,831	-				+1.9
5,749,957	-		PFLU_RS25750	0.25	+1.9
5,749,957	-		PFLU_RS25750	0.25	+0.3
5,749,957	-		PFLU_RS25750	0.25	+1.9