Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS25735

Experiment: Glucose (C) and Betaine (N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Betaine (N); with MOPS; with chloride
5,744,496	+		PFLU_RS25730	0.69	-1.7
5,744,496	+		PFLU_RS25730	0.69	-0.1
5,744,496	+		PFLU_RS25730	0.69	+0.3
5,744,496	+		PFLU_RS25730	0.69	-0.9
5,744,497	-		PFLU_RS25730	0.69	+0.9
5,744,497	-		PFLU_RS25730	0.69	-0.9
5,744,497	-		PFLU_RS25730	0.69	+0.3
5,744,497	-		PFLU_RS25730	0.69	-0.4
5,744,497	-		PFLU_RS25730	0.69	-0.4
5,744,661	-		PFLU_RS25730	0.74	-0.4
5,744,661	-		PFLU_RS25730	0.74	+1.9
5,745,014	+		PFLU_RS25730	0.86	+0.6
5,745,014	+		PFLU_RS25730	0.86	+0.7
5,745,014	+		PFLU_RS25730	0.86	-0.9
5,745,014	+		PFLU_RS25730	0.86	-1.3
5,745,015	-		PFLU_RS25730	0.86	+0.3
5,745,015	-		PFLU_RS25730	0.86	+1.3
5,745,015	-		PFLU_RS25730	0.86	+0.9
5,745,015	-		PFLU_RS25730	0.86	-1.3
5,745,015	-		PFLU_RS25730	0.86	+0.3
5,745,015	-		PFLU_RS25730	0.86	-0.1
5,745,015	-		PFLU_RS25730	0.86	-0.1
5,745,015	-		PFLU_RS25730	0.86	+0.9
5,745,015	-		PFLU_RS25730	0.86	+1.9
5,745,015	-		PFLU_RS25730	0.86	-0.9
5,745,015	-		PFLU_RS25730	0.86	-0.7
5,745,015	-		PFLU_RS25730	0.86	+0.9
5,745,162	+				-2.0
5,745,162	+				-2.2
5,745,162	+				+0.3
5,745,162	+				-0.4
5,745,162	+				-0.4
5,745,162	+				-0.7
5,745,162	+				-0.8
5,745,162	+				+0.9
5,745,163	-				+0.5
5,745,163	-				+0.3
5,745,163	-				-0.1
5,745,163	-				-0.9
5,745,163	-				-1.2
5,745,163	-				-0.4
5,745,163	-				-1.4
5,745,163	-				-0.4
5,745,163	-				-1.1
5,745,163	-				+0.1
5,745,163	-				+0.9
5,745,163	-				-0.9
5,745,163	-				-0.7
5,745,163	-				+0.3
5,745,163	-				-1.7
5,745,163	-				+0.9
5,745,193	-				-1.9
5,745,198	+				-0.2
5,745,198	+				-0.1
5,745,199	-				-0.9
5,745,199	-				+1.9
5,745,289	+				-2.4
5,745,289	+				-1.2
5,745,289	+				+1.7
5,745,289	+				-2.4
5,745,289	+				+0.3
5,745,290	-				+1.9
5,745,290	-				-0.4
5,745,290	-				-0.4
5,745,290	-				-2.1
5,745,310	+				+1.2
5,745,311	-				+0.3
5,745,515	+				+0.9
5,745,515	+				+0.9
5,745,671	+		PFLU_RS25735	0.16	-0.7
5,745,671	+		PFLU_RS25735	0.16	-0.7
5,745,672	-		PFLU_RS25735	0.16	+0.3
5,745,672	-		PFLU_RS25735	0.16	+0.3
5,745,672	-		PFLU_RS25735	0.16	-0.9
5,745,672	-		PFLU_RS25735	0.16	-0.1
5,745,722	+		PFLU_RS25735	0.20	-0.9
5,745,722	+		PFLU_RS25735	0.20	-0.1
5,745,722	+		PFLU_RS25735	0.20	-0.4
5,745,722	+		PFLU_RS25735	0.20	+0.9
5,745,722	+		PFLU_RS25735	0.20	+0.9
5,745,722	+		PFLU_RS25735	0.20	+0.9
5,745,722	+		PFLU_RS25735	0.20	-0.4
5,745,722	+		PFLU_RS25735	0.20	+0.9
5,745,723	-		PFLU_RS25735	0.20	-0.1
5,745,723	-		PFLU_RS25735	0.20	-1.2
5,745,723	-		PFLU_RS25735	0.20	+1.9
5,745,723	-		PFLU_RS25735	0.20	-0.7
5,745,723	-		PFLU_RS25735	0.20	+0.3
5,745,842	-		PFLU_RS25735	0.28	+1.9
5,745,911	+		PFLU_RS25735	0.33	+0.9
5,745,912	-		PFLU_RS25735	0.33	+1.9
5,745,912	-		PFLU_RS25735	0.33	+0.3
5,745,930	+		PFLU_RS25735	0.34	+1.9
5,745,951	+		PFLU_RS25735	0.36	-0.7
5,745,951	+		PFLU_RS25735	0.36	-0.4
5,745,951	+		PFLU_RS25735	0.36	+0.6
5,745,951	+		PFLU_RS25735	0.36	-0.7
5,745,951	+		PFLU_RS25735	0.36	+0.9
5,745,952	-		PFLU_RS25735	0.36	+0.3
5,745,952	-		PFLU_RS25735	0.36	-0.1
5,745,952	-		PFLU_RS25735	0.36	+0.3
5,745,952	-		PFLU_RS25735	0.36	-0.1
5,745,952	-		PFLU_RS25735	0.36	+0.9
5,745,952	-		PFLU_RS25735	0.36	-0.4
5,745,952	-		PFLU_RS25735	0.36	-0.4
5,746,143	+		PFLU_RS25735	0.49	+1.9
5,746,144	-		PFLU_RS25735	0.49	-0.1
5,746,144	-		PFLU_RS25735	0.49	+0.3
5,746,144	-		PFLU_RS25735	0.49	+0.9
5,746,228	-		PFLU_RS25735	0.55	+1.1
5,746,228	-		PFLU_RS25735	0.55	+0.3
5,746,228	-		PFLU_RS25735	0.55	+0.9
5,746,251	+		PFLU_RS25735	0.57	+0.9
5,746,252	-		PFLU_RS25735	0.57	+1.5
5,746,352	+		PFLU_RS25735	0.64	-0.9
5,746,352	+		PFLU_RS25735	0.64	-0.7
5,746,352	+		PFLU_RS25735	0.64	+1.9
5,746,352	+		PFLU_RS25735	0.64	+0.3
5,746,352	+		PFLU_RS25735	0.64	+0.9
5,746,352	+		PFLU_RS25735	0.64	-0.9
5,746,352	+		PFLU_RS25735	0.64	-0.7
5,746,352	+		PFLU_RS25735	0.64	+0.3
5,746,353	-		PFLU_RS25735	0.64	-1.2
5,746,353	-		PFLU_RS25735	0.64	+1.9
5,746,353	-		PFLU_RS25735	0.64	+0.3
5,746,353	-		PFLU_RS25735	0.64	+0.3
5,746,353	-		PFLU_RS25735	0.64	+0.9
5,746,355	+		PFLU_RS25735	0.64	-1.1
5,746,511	+		PFLU_RS25735	0.75	-0.4
5,746,511	+		PFLU_RS25735	0.75	-1.2
5,746,539	+		PFLU_RS25735	0.77	+0.3
5,746,539	+		PFLU_RS25735	0.77	-0.4
5,746,539	+		PFLU_RS25735	0.77	-0.4
5,746,721	+		PFLU_RS25735	0.90	+0.3
5,746,721	+		PFLU_RS25735	0.90	-1.5
5,746,722	-		PFLU_RS25735	0.90	-0.7
5,746,722	-		PFLU_RS25735	0.90	+0.3
5,746,756	+				-0.9
5,746,756	+				-0.1
5,746,756	+				+0.3
5,746,756	+				+0.9
5,746,757	-				-0.7
5,746,757	-				-0.7
5,746,757	-				+0.3
5,746,757	-				+1.3
5,746,757	-				+0.3
5,746,757	-				+1.9
5,746,757	-				-0.9
5,746,831	+				+2.3
5,746,888	+				-1.5
5,746,888	+				-0.7
5,746,888	+				-0.4
5,746,888	+				+1.9
5,746,889	-				+1.2
5,746,889	-				-1.9
5,746,889	-				-0.7
5,746,950	+				-0.4
5,746,950	+				-0.4
5,746,950	+				+0.0
5,746,951	-				-1.3
5,747,051	+				+0.6
5,747,051	+				+0.7
5,747,051	+				-0.1
5,747,051	+				+0.3
5,747,052	-				+1.1
5,747,052	-				-0.5
5,747,052	-				-0.5
5,747,052	-				+1.3
5,747,052	-				-0.7
5,747,052	-				-0.5
5,747,052	-				-0.1
5,747,053	+				-1.1
5,747,053	+				-0.5
5,747,053	+				-0.5
5,747,053	+				+1.9
5,747,054	-				-0.7
5,747,059	+				+0.1
5,747,059	+				-1.8
5,747,059	+				-0.6
5,747,059	+				-1.1
5,747,059	+				-0.6
5,747,059	+				-0.6
5,747,059	+				-2.0
5,747,059	+				-0.2
5,747,060	-				+0.1
5,747,060	-				+0.7
5,747,062	+				-0.7
5,747,062	+				+0.3
5,747,062	+				-0.6
5,747,063	-				+0.9
5,747,074	-				+1.5
5,747,074	-				-0.4
5,747,074	-				+0.5
5,747,085	+				+0.7
5,747,085	+				+0.9
5,747,085	+				+0.3
5,747,085	+				+0.8
5,747,085	+				+0.1
5,747,085	+				+0.1
5,747,085	+				+0.3
5,747,086	-				-0.5
5,747,086	-				-0.7
5,747,086	-				-0.6
5,747,086	-				-1.9
5,747,095	+				-0.6
5,747,095	+				-0.5
5,747,096	-				-0.5
5,747,101	+				-0.4
5,747,122	+				-2.1
5,747,122	+				-0.3
5,747,122	+				+0.8
5,747,151	+				+1.8
5,747,151	+				+0.3
5,747,151	+				-0.4
5,747,151	+				-1.5
5,747,151	+				-0.6
5,747,151	+				+0.3
5,747,151	+				+0.9
5,747,152	-				+0.7
5,747,152	-				+0.0
5,747,152	-				-1.5
5,747,152	-				-0.6
5,747,152	-				+0.4
5,747,226	-				+0.2
5,747,226	-				-0.7
5,747,253	+				+0.2
5,747,253	+				-0.3
5,747,253	+				+0.3
5,747,253	+				-0.8
5,747,253	+				+0.0
5,747,254	-				-0.3
5,747,254	-				-1.7
5,747,254	-				-0.1
5,747,254	-				+0.0
5,747,254	-				-1.1
5,747,254	-				+0.3
5,747,371	+		PFLU_RS31095	0.22	-1.5
5,747,371	+		PFLU_RS31095	0.22	+0.3
5,747,372	-		PFLU_RS31095	0.23	+0.9
5,747,375	-		PFLU_RS31095	0.24	-0.3
5,747,381	-		PFLU_RS31095	0.27	-2.6
5,747,381	-		PFLU_RS31095	0.27	+0.8
5,747,393	+		PFLU_RS31095	0.34	+1.7
5,747,393	+		PFLU_RS31095	0.34	-1.3
5,747,393	+		PFLU_RS31095	0.34	-0.4
5,747,393	+		PFLU_RS31095	0.34	+0.9
5,747,393	+		PFLU_RS31095	0.34	+0.6
5,747,393	+		PFLU_RS31095	0.34	-0.4
5,747,393	+		PFLU_RS31095	0.34	-1.4
5,747,393	+		PFLU_RS31095	0.34	-0.5
5,747,393	+		PFLU_RS31095	0.34	-2.3
5,747,393	+		PFLU_RS31095	0.34	+0.6
5,747,394	-		PFLU_RS31095	0.34	-0.3
5,747,394	-		PFLU_RS31095	0.34	+0.3
5,747,394	-		PFLU_RS31095	0.34	-1.3
5,747,394	-		PFLU_RS31095	0.34	-1.0
5,747,394	-		PFLU_RS31095	0.34	+0.3
5,747,394	-		PFLU_RS31095	0.34	-0.5
5,747,394	-		PFLU_RS31095	0.34	-1.9
5,747,394	-		PFLU_RS31095	0.34	+1.3
5,747,422	+		PFLU_RS31095	0.49	-1.7
5,747,422	+		PFLU_RS31095	0.49	-0.0
5,747,422	+		PFLU_RS31095	0.49	+1.3
5,747,422	+		PFLU_RS31095	0.49	+1.1
5,747,422	+		PFLU_RS31095	0.49	-0.7
5,747,422	+		PFLU_RS31095	0.49	+2.2
5,747,422	+		PFLU_RS31095	0.49	-1.1
5,747,422	+		PFLU_RS31095	0.49	-0.7
5,747,422	+		PFLU_RS31095	0.49	-0.4
5,747,423	-		PFLU_RS31095	0.50	-0.8
5,747,423	-		PFLU_RS31095	0.50	+1.7
5,747,423	-		PFLU_RS31095	0.50	-0.9
5,747,423	-		PFLU_RS31095	0.50	-0.2
5,747,423	-		PFLU_RS31095	0.50	+0.3
5,747,423	-		PFLU_RS31095	0.50	+0.2
5,747,456	-		PFLU_RS31095	0.68	+0.9
5,747,463	+		PFLU_RS31095	0.72	-0.7
5,747,464	-		PFLU_RS31095	0.72	-0.2
5,747,479	+		PFLU_RS31095	0.80	-0.3
5,747,480	-		PFLU_RS31095	0.81	-0.7
5,747,480	-		PFLU_RS31095	0.81	-2.0
5,747,480	-		PFLU_RS31095	0.81	+0.4
5,747,480	-		PFLU_RS31095	0.81	-0.8
5,747,480	-		PFLU_RS31095	0.81	+0.9
5,747,480	-		PFLU_RS31095	0.81	-0.2
5,747,480	-		PFLU_RS31095	0.81	+0.7
5,747,480	-		PFLU_RS31095	0.81	-1.7
5,747,480	-		PFLU_RS31095	0.81	-1.3
5,747,480	-		PFLU_RS31095	0.81	-1.7
5,747,480	-		PFLU_RS31095	0.81	-0.4
5,747,490	+		PFLU_RS31095	0.86	-1.8
5,747,490	+		PFLU_RS31095	0.86	+1.4
5,747,491	-		PFLU_RS31095	0.87	+0.9
5,747,491	-		PFLU_RS31095	0.87	-0.6
5,747,506	+				+0.8
5,747,506	+				+0.3
5,747,506	+				+0.9
5,747,507	-				+0.8
5,747,507	-				+1.5
5,747,507	-				-0.4
5,747,507	-				+1.2
5,747,513	+				+2.2
5,747,513	+				-1.1
5,747,513	+				+0.7
5,747,513	+				+0.2
5,747,513	+				-0.2
5,747,513	+				+0.9
5,747,514	-				+0.9
5,747,514	-				-0.5
5,747,514	-				+0.1
5,747,624	+				-0.1
5,747,624	+				-1.1
5,747,624	+				-2.5
5,747,625	-				-0.9
5,747,625	-				-0.9
5,747,748	+		PFLU_RS25740	0.12	-0.9
5,747,748	+		PFLU_RS25740	0.12	+1.9
5,747,748	+		PFLU_RS25740	0.12	+0.9
5,747,749	-		PFLU_RS25740	0.12	+0.3
5,747,749	-		PFLU_RS25740	0.12	+0.3
5,747,786	+		PFLU_RS25740	0.15	+1.5
5,747,786	+		PFLU_RS25740	0.15	-0.4
5,747,822	+		PFLU_RS25740	0.17	-0.1
5,747,836	+		PFLU_RS25740	0.18	-0.1
5,747,836	+		PFLU_RS25740	0.18	-0.4
5,747,837	-		PFLU_RS25740	0.18	-0.9
5,747,861	+		PFLU_RS25740	0.20	-0.1
5,747,861	+		PFLU_RS25740	0.20	-0.4