Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS23240

Experiment: Glucose (C) and Betaine (N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Betaine (N); with MOPS; with chloride
5,217,428	+				-0.8
5,217,428	+				+0.3
5,217,428	+				-0.0
5,217,428	+				-0.5
5,217,429	-				-0.0
5,217,429	-				-1.1
5,217,433	+				-1.3
5,217,433	+				+0.2
5,217,433	+				+0.6
5,217,433	+				+0.9
5,217,433	+				+0.4
5,217,433	+				-1.1
5,217,433	+				+0.4
5,217,433	+				-1.0
5,217,433	+				-0.7
5,217,433	+				-1.3
5,217,433	+				-0.5
5,217,433	+				+0.4
5,217,433	+				-0.2
5,217,433	+				+1.7
5,217,433	+				-0.7
5,217,433	+				+0.1
5,217,433	+				-1.1
5,217,433	+				-1.7
5,217,433	+				-0.7
5,217,434	-				+0.7
5,217,434	-				-0.1
5,217,434	-				+1.5
5,217,434	-				-0.7
5,217,434	-				+0.2
5,217,434	-				+0.1
5,217,434	-				-0.9
5,217,434	-				+0.1
5,217,434	-				+0.5
5,217,434	-				+0.8
5,217,434	-				+0.2
5,217,434	-				-1.8
5,217,434	-				+1.0
5,217,434	-				-0.2
5,217,434	-				-1.1
5,217,434	-				-0.9
5,217,434	-				+0.3
5,217,434	-				-1.0
5,217,434	-				-1.0
5,217,434	-				-1.1
5,217,434	-				+0.9
5,217,434	-				-0.0
5,217,434	-				+0.7
5,217,434	-				+0.6
5,217,434	-				+0.6
5,217,434	-				+0.8
5,217,434	-				+0.3
5,217,434	-				-1.5
5,217,434	-				+0.1
5,217,434	-				-0.3
5,217,452	+				-0.2
5,217,471	-				-0.1
5,217,476	+				-2.0
5,217,476	+				-0.7
5,217,482	+				+0.7
5,217,482	+				-0.5
5,217,622	-		PFLU_RS31780	0.45	+0.4
5,217,630	+		PFLU_RS31780	0.48	-0.8
5,217,642	+		PFLU_RS31780	0.54	+0.0
5,217,643	-		PFLU_RS31780	0.54	+1.7
5,217,738	+				+0.3
5,217,738	+				+1.7
5,217,739	-				+0.1
5,217,739	-				-1.3
5,217,782	+				-0.3
5,217,783	-				+0.2
5,217,783	-				-0.3
5,217,790	+				-0.5
5,217,791	-				+0.7
5,217,794	+				-0.9
5,217,794	+				+0.1
5,217,794	+				+2.7
5,217,794	+				-0.7
5,217,794	+				-0.1
5,217,794	+				-0.7
5,217,795	-				+2.7
5,217,795	-				+0.4
5,217,795	-				+3.2
5,217,795	-				-2.4
5,217,795	-				-2.3
5,217,795	-				-1.3
5,217,796	+				+1.7
5,217,796	+				-0.2
5,217,796	+				-0.6
5,217,797	-				-0.7
5,217,832	+		PFLU_RS23235	0.11	+0.0
5,217,852	+		PFLU_RS23235	0.17	+0.1
5,217,852	+		PFLU_RS23235	0.17	+3.7
5,217,852	+		PFLU_RS23235	0.17	-0.9
5,217,852	+		PFLU_RS23235	0.17	+1.2
5,217,853	-		PFLU_RS23235	0.17	-1.3
5,217,853	-		PFLU_RS23235	0.17	-0.1
5,217,853	-		PFLU_RS23235	0.17	+1.3
5,217,853	-		PFLU_RS23235	0.17	+0.1
5,218,189	+				+1.8
5,218,189	+				+0.9
5,218,189	+				-1.8
5,218,189	+				-0.3
5,218,189	+				-0.5
5,218,189	+				+0.7
5,218,189	+				+0.1
5,218,189	+				+0.1
5,218,189	+				-0.1
5,218,190	-				-0.3
5,218,190	-				+0.3
5,218,190	-				+0.3
5,218,190	-				-0.1
5,218,190	-				-1.7
5,218,190	-				-0.2
5,218,190	-				-2.9
5,218,190	-				-0.5
5,218,191	+				+1.1
5,218,191	+				+0.6
5,218,191	+				+1.4
5,218,191	+				-0.5
5,218,191	+				+0.7
5,218,191	+				+1.0
5,218,192	-				-0.2
5,218,192	-				+1.7
5,218,192	-				-0.7
5,218,192	-				-0.7
5,218,208	+				-0.5
5,218,209	-				-1.2
5,218,255	+		PFLU_RS31785	0.27	-0.6
5,218,255	+		PFLU_RS31785	0.27	+0.2
5,218,255	+		PFLU_RS31785	0.27	-0.9
5,218,256	-		PFLU_RS31785	0.27	+0.9
5,218,256	-		PFLU_RS31785	0.27	+0.4
5,218,256	-		PFLU_RS31785	0.27	+0.9
5,218,256	-		PFLU_RS31785	0.27	+0.3
5,218,256	-		PFLU_RS31785	0.27	+0.7
5,218,545	+		PFLU_RS23240	0.14	+0.7
5,218,545	+		PFLU_RS23240	0.14	-0.1
5,218,545	+		PFLU_RS23240	0.14	+0.7
5,218,545	+		PFLU_RS23240	0.14	-1.3
5,218,546	-		PFLU_RS23240	0.14	-0.3
5,218,546	-		PFLU_RS23240	0.14	+1.7
5,218,546	-		PFLU_RS23240	0.14	-0.3
5,218,547	+		PFLU_RS23240	0.14	-0.3
5,218,547	+		PFLU_RS23240	0.14	-0.9
5,218,547	+		PFLU_RS23240	0.14	+0.7
5,218,547	+		PFLU_RS23240	0.14	-1.1
5,218,547	+		PFLU_RS23240	0.14	-0.3
5,218,547	+		PFLU_RS23240	0.14	-0.7
5,218,547	+		PFLU_RS23240	0.14	+2.4
5,218,547	+		PFLU_RS23240	0.14	+0.1
5,218,547	+		PFLU_RS23240	0.14	-1.1
5,218,547	+		PFLU_RS23240	0.14	-1.1
5,218,547	+		PFLU_RS23240	0.14	+1.7
5,218,547	+		PFLU_RS23240	0.14	-1.1
5,218,547	+		PFLU_RS23240	0.14	+0.3
5,218,547	+		PFLU_RS23240	0.14	-0.3
5,218,547	+		PFLU_RS23240	0.14	-1.5
5,218,547	+		PFLU_RS23240	0.14	+0.1
5,218,547	+		PFLU_RS23240	0.14	+0.7
5,218,547	+		PFLU_RS23240	0.14	+0.3
5,218,547	+		PFLU_RS23240	0.14	+0.1
5,218,547	+		PFLU_RS23240	0.14	-1.3
5,218,547	+		PFLU_RS23240	0.14	+0.7
5,218,547	+		PFLU_RS23240	0.14	+0.3
5,218,547	+		PFLU_RS23240	0.14	+0.7
5,218,547	+		PFLU_RS23240	0.14	+1.2
5,218,547	+		PFLU_RS23240	0.14	-0.3
5,218,547	+		PFLU_RS23240	0.14	-1.1
5,218,547	+		PFLU_RS23240	0.14	-0.9
5,218,547	+		PFLU_RS23240	0.14	-0.9
5,218,547	+		PFLU_RS23240	0.14	-0.7
5,218,547	+		PFLU_RS23240	0.14	+0.7
5,218,547	+		PFLU_RS23240	0.14	+0.7
5,218,548	-		PFLU_RS23240	0.14	+1.0
5,218,548	-		PFLU_RS23240	0.14	+0.1
5,218,548	-		PFLU_RS23240	0.14	-1.8
5,218,548	-		PFLU_RS23240	0.14	+0.1
5,218,548	-		PFLU_RS23240	0.14	+0.9
5,218,548	-		PFLU_RS23240	0.14	+0.7
5,218,548	-		PFLU_RS23240	0.14	+1.7
5,218,548	-		PFLU_RS23240	0.14	+0.7
5,218,548	-		PFLU_RS23240	0.14	-0.3
5,218,548	-		PFLU_RS23240	0.14	+0.7
5,218,548	-		PFLU_RS23240	0.14	+1.7
5,218,548	-		PFLU_RS23240	0.14	-0.3
5,218,548	-		PFLU_RS23240	0.14	-2.3
5,218,548	-		PFLU_RS23240	0.14	-0.3
5,218,548	-		PFLU_RS23240	0.14	+1.7
5,218,548	-		PFLU_RS23240	0.14	+1.9
5,218,548	-		PFLU_RS23240	0.14	-1.7
5,218,548	-		PFLU_RS23240	0.14	+0.7
5,218,548	-		PFLU_RS23240	0.14	-0.7
5,218,548	-		PFLU_RS23240	0.14	-0.7
5,218,548	-		PFLU_RS23240	0.14	-0.3
5,218,548	-		PFLU_RS23240	0.14	-0.7
5,218,548	-		PFLU_RS23240	0.14	-0.1
5,218,554	+		PFLU_RS23240	0.15	-0.3
5,218,554	+		PFLU_RS23240	0.15	-0.3
5,218,554	+		PFLU_RS23240	0.15	-0.7
5,218,554	+		PFLU_RS23240	0.15	+0.9
5,218,555	-		PFLU_RS23240	0.15	+0.1
5,218,595	+		PFLU_RS23240	0.18	+3.7
5,218,596	-		PFLU_RS23240	0.18	-0.7
5,218,596	-		PFLU_RS23240	0.18	-0.3
5,218,645	+		PFLU_RS23240	0.21	-0.3
5,218,645	+		PFLU_RS23240	0.21	-0.7
5,218,684	+		PFLU_RS23240	0.24	-0.7
5,218,684	+		PFLU_RS23240	0.24	-1.3
5,218,685	-		PFLU_RS23240	0.24	+1.3
5,218,685	-		PFLU_RS23240	0.24	-0.7
5,218,685	-		PFLU_RS23240	0.24	+1.7
5,218,807	+		PFLU_RS23240	0.32	-1.7
5,218,841	-		PFLU_RS23240	0.35	+0.1
5,218,871	-		PFLU_RS23240	0.37	-0.3
5,218,871	-		PFLU_RS23240	0.37	-1.3
5,218,871	-		PFLU_RS23240	0.37	+0.7
5,219,010	+		PFLU_RS23240	0.46	+1.7
5,219,010	+		PFLU_RS23240	0.46	+0.7
5,219,011	-		PFLU_RS23240	0.47	+0.7
5,219,011	-		PFLU_RS23240	0.47	+0.9
5,219,037	+		PFLU_RS23240	0.48	+1.7
5,219,037	+		PFLU_RS23240	0.48	-0.7
5,219,037	+		PFLU_RS23240	0.48	+1.7
5,219,037	+		PFLU_RS23240	0.48	+1.7
5,219,038	-		PFLU_RS23240	0.48	+1.7
5,219,038	-		PFLU_RS23240	0.48	-0.3
5,219,038	-		PFLU_RS23240	0.48	+1.7
5,219,038	-		PFLU_RS23240	0.48	-0.5
5,219,038	-		PFLU_RS23240	0.48	+3.3
5,219,038	-		PFLU_RS23240	0.48	-0.7
5,219,038	-		PFLU_RS23240	0.48	-1.7
5,219,157	+		PFLU_RS23240	0.57	+0.1
5,219,214	+		PFLU_RS23240	0.61	+0.7
5,219,214	+		PFLU_RS23240	0.61	+0.1
5,219,214	+		PFLU_RS23240	0.61	+0.1
5,219,215	-		PFLU_RS23240	0.61	+0.7
5,219,225	+		PFLU_RS23240	0.61	-0.9
5,219,225	+		PFLU_RS23240	0.61	-0.7
5,219,225	+		PFLU_RS23240	0.61	-1.7
5,219,226	-		PFLU_RS23240	0.61	-0.3
5,219,226	-		PFLU_RS23240	0.61	-0.3
5,219,226	-		PFLU_RS23240	0.61	-1.1
5,219,226	-		PFLU_RS23240	0.61	-0.7
5,219,226	-		PFLU_RS23240	0.61	-0.7
5,219,226	-		PFLU_RS23240	0.61	-0.7
5,219,226	-		PFLU_RS23240	0.61	-1.1
5,219,226	-		PFLU_RS23240	0.61	-1.5
5,219,298	+		PFLU_RS23240	0.66	-0.3
5,219,298	+		PFLU_RS23240	0.66	-0.3
5,219,298	+		PFLU_RS23240	0.66	-0.7
5,219,298	+		PFLU_RS23240	0.66	-1.7
5,219,298	+		PFLU_RS23240	0.66	+0.7
5,219,299	-		PFLU_RS23240	0.66	+2.0
5,219,299	-		PFLU_RS23240	0.66	-1.0
5,219,299	-		PFLU_RS23240	0.66	-1.3
5,219,484	-		PFLU_RS23240	0.79	+1.1
5,219,484	-		PFLU_RS23240	0.79	-0.9
5,219,484	-		PFLU_RS23240	0.79	+0.7
5,219,569	+		PFLU_RS23240	0.85	-1.7
5,219,569	+		PFLU_RS23240	0.85	-1.9
5,219,569	+		PFLU_RS23240	0.85	-2.0
5,219,570	-		PFLU_RS23240	0.85	+0.9
5,219,570	-		PFLU_RS23240	0.85	+1.4
5,219,570	-		PFLU_RS23240	0.85	-1.3
5,219,571	+		PFLU_RS23240	0.85	-0.5
5,219,571	+		PFLU_RS23240	0.85	-0.7
5,219,571	+		PFLU_RS23240	0.85	+3.3
5,219,571	+		PFLU_RS23240	0.85	-0.9
5,219,571	+		PFLU_RS23240	0.85	+0.7
5,219,571	+		PFLU_RS23240	0.85	+0.9
5,219,572	-		PFLU_RS23240	0.85	-1.1
5,219,572	-		PFLU_RS23240	0.85	-0.7
5,219,572	-		PFLU_RS23240	0.85	+0.4
5,219,572	-		PFLU_RS23240	0.85	+0.1
5,219,572	-		PFLU_RS23240	0.85	+0.7
5,219,572	-		PFLU_RS23240	0.85	-0.9
5,219,572	-		PFLU_RS23240	0.85	-0.9
5,219,765	+				-2.3
5,219,766	-				+1.7
5,219,771	+				+0.7
5,219,771	+				-1.1
5,219,772	-				-1.5
5,219,783	-				+0.2
5,219,783	-				-2.2
5,219,783	-				-0.6
5,219,846	+				+0.7
5,219,846	+				-0.9
5,219,846	+				-0.3
5,219,847	-				-1.6
5,219,847	-				-0.6
5,219,847	-				-0.9
5,219,867	+				-1.3
5,219,867	+				+0.8
5,219,874	+				+0.1
5,219,874	+				-0.9
5,219,875	-				-0.2
5,219,875	-				+0.2
5,219,888	+				+1.3
5,219,889	-				-0.7
5,219,889	-				-1.6
5,219,889	-				+0.7
5,219,926	+				-0.9
5,219,926	+				-0.0
5,219,926	+				+0.8
5,219,926	+				-0.9
5,219,926	+				-1.0
5,219,926	+				-0.5
5,219,927	-				-1.7
5,219,927	-				+0.1
5,219,927	-				+0.2
5,219,927	-				+0.5
5,219,927	-				+0.2
5,219,927	-				-0.2
5,219,994	-				+1.7
5,220,006	+				+0.4
5,220,006	+				-1.3
5,220,006	+				+0.1
5,220,006	+				+1.7
5,220,006	+				+0.6
5,220,006	+				-1.0
5,220,006	+				-0.6
5,220,006	+				+1.3
5,220,006	+				-0.7
5,220,006	+				+0.3
5,220,006	+				-0.2
5,220,006	+				+1.5
5,220,007	-				-0.8
5,220,007	-				-0.3
5,220,007	-				+2.2
5,220,007	-				+2.7
5,220,007	-				+0.7
5,220,007	-				-0.1
5,220,007	-				+0.6
5,220,007	-				+0.2
5,220,007	-				-0.1
5,220,007	-				-0.1
5,220,007	-				+1.7
5,220,007	-				+2.3
5,220,007	-				-0.9
5,220,070	+				+0.4
5,220,070	+				-0.7
5,220,070	+				+0.7
5,220,070	+				-0.5
5,220,070	+				-0.7
5,220,071	-				+0.2
5,220,071	-				+0.4
5,220,122	-				-0.3
5,220,122	-				-0.9
5,220,122	-				-0.1
5,220,122	-				-1.1
5,220,122	-				+0.9
5,220,122	-				+1.6
5,220,122	-				+1.3
5,220,122	-				+0.1
5,220,122	-				+0.2
5,220,122	-				-1.1
5,220,122	-				+0.5
5,220,122	-				+0.4
5,220,122	-				+0.1
5,220,122	-				+0.4
5,220,122	-				+0.0
5,220,179	-		PFLU_RS23245	0.73	+1.1
5,220,192	-				-1.7
5,220,235	-				+0.1
5,220,235	-				+0.1
5,220,269	-				-0.1
5,220,269	-				-0.0
5,220,269	-				-1.1
5,220,269	-				+0.3
5,220,269	-				-1.3
5,220,269	-				+1.1
5,220,269	-				-0.4
5,220,269	-				-1.3
5,220,368	-				+3.7
5,220,368	-				-1.5
5,220,368	-				+0.3
5,220,444	-				-1.8
5,220,447	-				+2.5
5,220,455	-				+0.7
5,220,455	-				-0.9
5,220,455	-				+0.2
5,220,654	-		PFLU_RS23260	0.23	-0.2
5,220,654	-		PFLU_RS23260	0.23	+0.3
5,220,677	-		PFLU_RS23260	0.35	+0.8
5,220,702	+		PFLU_RS23260	0.49	+1.9
5,220,703	-		PFLU_RS23260	0.49	+0.4
5,220,703	-		PFLU_RS23260	0.49	+0.5
5,220,706	+		PFLU_RS23260	0.51	-0.1
5,220,706	+		PFLU_RS23260	0.51	+1.7
5,220,706	+		PFLU_RS23260	0.51	-2.1
5,220,706	+		PFLU_RS23260	0.51	-0.3
5,220,706	+		PFLU_RS23260	0.51	-0.5
5,220,706	+		PFLU_RS23260	0.51	-0.1
5,220,706	+		PFLU_RS23260	0.51	-0.5
5,220,706	+		PFLU_RS23260	0.51	+0.2
5,220,707	-		PFLU_RS23260	0.51	+0.1
5,220,707	-		PFLU_RS23260	0.51	+1.4
5,220,707	-		PFLU_RS23260	0.51	+0.7
5,220,707	-		PFLU_RS23260	0.51	+0.5
5,220,707	-		PFLU_RS23260	0.51	+1.9
5,220,707	-		PFLU_RS23260	0.51	+0.8
5,220,707	-		PFLU_RS23260	0.51	-0.3
5,220,707	-		PFLU_RS23260	0.51	-0.7
5,220,707	-		PFLU_RS23260	0.51	-1.1
5,220,707	-		PFLU_RS23260	0.51	-0.1
5,220,707	-		PFLU_RS23260	0.51	+0.9
5,220,707	-		PFLU_RS23260	0.51	-0.2
5,220,707	-		PFLU_RS23260	0.51	+0.7
5,220,707	-		PFLU_RS23260	0.51	+0.4
5,220,707	-		PFLU_RS23260	0.51	-1.9