Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21665

Experiment: Glucose (C) and Betaine (N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Betaine (N); with MOPS; with chloride
4,881,549	-		PFLU_RS21655	0.77	+2.1
4,881,579	+		PFLU_RS21655	0.84	+1.0
4,881,580	-		PFLU_RS21655	0.85	-0.3
4,881,658	+				+0.6
4,881,658	+				+0.3
4,881,659	-				+0.8
4,881,703	+				+0.9
4,881,703	+				+1.4
4,881,703	+				-2.5
4,881,703	+				+0.5
4,881,703	+				-0.8
4,881,704	-				-0.5
4,881,704	-				-3.0
4,881,921	+		PFLU_RS21660	0.17	+0.4
4,881,921	+		PFLU_RS21660	0.17	+0.2
4,881,921	+		PFLU_RS21660	0.17	+0.8
4,881,921	+		PFLU_RS21660	0.17	-0.2
4,881,921	+		PFLU_RS21660	0.17	+0.1
4,881,921	+		PFLU_RS21660	0.17	-1.3
4,881,921	+		PFLU_RS21660	0.17	+0.2
4,881,922	-		PFLU_RS21660	0.17	+0.3
4,881,924	+		PFLU_RS21660	0.18	-0.5
4,881,924	+		PFLU_RS21660	0.18	+2.5
4,881,924	+		PFLU_RS21660	0.18	+0.6
4,881,925	-		PFLU_RS21660	0.18	+0.5
4,881,925	-		PFLU_RS21660	0.18	+1.7
4,881,925	-		PFLU_RS21660	0.18	+2.3
4,881,925	-		PFLU_RS21660	0.18	-0.1
4,882,024	+		PFLU_RS21660	0.31	+0.3
4,882,024	+		PFLU_RS21660	0.31	+0.3
4,882,024	+		PFLU_RS21660	0.31	+0.9
4,882,025	-		PFLU_RS21660	0.31	+0.6
4,882,025	-		PFLU_RS21660	0.31	-0.5
4,882,025	-		PFLU_RS21660	0.31	-1.8
4,882,025	-		PFLU_RS21660	0.31	+1.5
4,882,111	+		PFLU_RS21660	0.43	+0.9
4,882,111	+		PFLU_RS21660	0.43	+0.1
4,882,111	+		PFLU_RS21660	0.43	-0.1
4,882,111	+		PFLU_RS21660	0.43	+0.2
4,882,111	+		PFLU_RS21660	0.43	+4.0
4,882,111	+		PFLU_RS21660	0.43	-0.7
4,882,111	+		PFLU_RS21660	0.43	-0.4
4,882,112	-		PFLU_RS21660	0.43	-1.2
4,882,112	-		PFLU_RS21660	0.43	+0.4
4,882,112	-		PFLU_RS21660	0.43	-0.9
4,882,131	+		PFLU_RS21660	0.45	+1.1
4,882,131	+		PFLU_RS21660	0.45	-1.2
4,882,132	-		PFLU_RS21660	0.46	+0.0
4,882,132	-		PFLU_RS21660	0.46	-1.0
4,882,132	-		PFLU_RS21660	0.46	+0.8
4,882,177	+		PFLU_RS21660	0.52	-0.1
4,882,234	+		PFLU_RS21660	0.59	+2.1
4,882,234	+		PFLU_RS21660	0.59	+0.7
4,882,235	-		PFLU_RS21660	0.60	+0.6
4,882,270	+		PFLU_RS21660	0.64	+0.6
4,882,270	+		PFLU_RS21660	0.64	+2.7
4,882,270	+		PFLU_RS21660	0.64	-1.2
4,882,270	+		PFLU_RS21660	0.64	+0.1
4,882,271	-		PFLU_RS21660	0.64	-0.7
4,882,271	-		PFLU_RS21660	0.64	-0.9
4,882,314	+		PFLU_RS21660	0.70	+1.5
4,882,314	+		PFLU_RS21660	0.70	+0.9
4,882,314	+		PFLU_RS21660	0.70	+0.4
4,882,314	+		PFLU_RS21660	0.70	+0.5
4,882,314	+		PFLU_RS21660	0.70	+1.3
4,882,314	+		PFLU_RS21660	0.70	+2.3
4,882,314	+		PFLU_RS21660	0.70	-0.1
4,882,314	+		PFLU_RS21660	0.70	+0.5
4,882,314	+		PFLU_RS21660	0.70	+0.3
4,882,314	+		PFLU_RS21660	0.70	-1.2
4,882,314	+		PFLU_RS21660	0.70	-0.1
4,882,314	+		PFLU_RS21660	0.70	+0.9
4,882,314	+		PFLU_RS21660	0.70	+0.5
4,882,314	+		PFLU_RS21660	0.70	+0.5
4,882,314	+		PFLU_RS21660	0.70	+0.4
4,882,314	+		PFLU_RS21660	0.70	+0.7
4,882,314	+		PFLU_RS21660	0.70	-0.4
4,882,315	-		PFLU_RS21660	0.70	+0.3
4,882,315	-		PFLU_RS21660	0.70	+0.4
4,882,315	-		PFLU_RS21660	0.70	-0.1
4,882,315	-		PFLU_RS21660	0.70	-0.3
4,882,315	-		PFLU_RS21660	0.70	+1.5
4,882,315	-		PFLU_RS21660	0.70	-1.0
4,882,315	-		PFLU_RS21660	0.70	+1.1
4,882,315	-		PFLU_RS21660	0.70	+1.1
4,882,315	-		PFLU_RS21660	0.70	+1.1
4,882,315	-		PFLU_RS21660	0.70	-0.8
4,882,315	-		PFLU_RS21660	0.70	-1.8
4,882,315	-		PFLU_RS21660	0.70	+0.0
4,882,315	-		PFLU_RS21660	0.70	+3.1
4,882,347	+		PFLU_RS21660	0.75	+0.1
4,882,347	+		PFLU_RS21660	0.75	+0.1
4,882,348	-		PFLU_RS21660	0.75	+0.1
4,882,348	-		PFLU_RS21660	0.75	+0.6
4,882,437	+		PFLU_RS21660	0.87	-0.9
4,882,437	+		PFLU_RS21660	0.87	+1.1
4,882,438	-		PFLU_RS21660	0.87	+0.9
4,882,438	-		PFLU_RS21660	0.87	+0.0
4,882,438	-		PFLU_RS21660	0.87	-0.3
4,882,509	+				+0.5
4,882,509	+				+1.3
4,882,509	+				+0.5
4,882,510	-				+0.2
4,882,510	-				+1.7
4,882,516	+				+0.6
4,882,517	-				-1.3
4,882,517	-				+0.8
4,882,518	+				-0.5
4,882,518	+				-0.7
4,882,518	+				+1.5
4,882,518	+				+0.4
4,882,518	+				+2.1
4,882,518	+				-0.6
4,882,518	+				+1.1
4,882,519	-				+0.6
4,882,519	-				+0.1
4,882,519	-				-0.9
4,882,519	-				+0.6
4,882,519	-				-0.7
4,882,519	-				-1.5
4,882,519	-				+1.1
4,882,534	+				+1.5
4,882,535	-				+0.7
4,882,535	-				-0.0
4,882,682	+		PFLU_RS21665	0.18	-1.1
4,882,682	+		PFLU_RS21665	0.18	-0.1
4,882,683	-		PFLU_RS21665	0.18	+0.9
4,882,683	-		PFLU_RS21665	0.18	-0.8
4,882,683	-		PFLU_RS21665	0.18	-1.3
4,882,745	+		PFLU_RS21665	0.26	-0.5
4,882,745	+		PFLU_RS21665	0.26	-1.8
4,882,745	+		PFLU_RS21665	0.26	-0.1
4,882,745	+		PFLU_RS21665	0.26	+3.1
4,882,745	+		PFLU_RS21665	0.26	-1.1
4,882,745	+		PFLU_RS21665	0.26	+0.5
4,882,745	+		PFLU_RS21665	0.26	+0.5
4,882,745	+		PFLU_RS21665	0.26	-1.3
4,882,745	+		PFLU_RS21665	0.26	-1.8
4,882,745	+		PFLU_RS21665	0.26	+0.5
4,882,745	+		PFLU_RS21665	0.26	+0.7
4,882,746	-		PFLU_RS21665	0.26	-1.7
4,882,746	-		PFLU_RS21665	0.26	+1.5
4,882,746	-		PFLU_RS21665	0.26	-0.1
4,882,746	-		PFLU_RS21665	0.26	-0.5
4,882,746	-		PFLU_RS21665	0.26	-0.5
4,882,746	-		PFLU_RS21665	0.26	+0.5
4,882,746	-		PFLU_RS21665	0.26	-1.5
4,882,746	-		PFLU_RS21665	0.26	+1.5
4,882,746	-		PFLU_RS21665	0.26	+1.5
4,882,746	-		PFLU_RS21665	0.26	-2.2
4,882,751	-		PFLU_RS21665	0.26	-1.3
4,882,751	-		PFLU_RS21665	0.26	+0.5
4,882,751	-		PFLU_RS21665	0.26	-0.8
4,882,751	-		PFLU_RS21665	0.26	-0.5
4,882,873	-		PFLU_RS21665	0.41	-1.9
4,882,892	+		PFLU_RS21665	0.43	+1.3
4,882,892	+		PFLU_RS21665	0.43	-0.8
4,882,936	+		PFLU_RS21665	0.49	+0.2
4,882,936	+		PFLU_RS21665	0.49	-1.9
4,882,936	+		PFLU_RS21665	0.49	-0.1
4,882,936	+		PFLU_RS21665	0.49	-1.5
4,882,937	-		PFLU_RS21665	0.49	-0.5
4,882,937	-		PFLU_RS21665	0.49	-1.3
4,882,937	-		PFLU_RS21665	0.49	+3.1
4,882,937	-		PFLU_RS21665	0.49	+2.5
4,882,937	-		PFLU_RS21665	0.49	+0.8
4,882,937	-		PFLU_RS21665	0.49	-0.8
4,882,937	-		PFLU_RS21665	0.49	-1.7
4,882,937	-		PFLU_RS21665	0.49	+0.5
4,882,937	-		PFLU_RS21665	0.49	-1.3
4,883,298	+				-0.8
4,883,298	+				-0.1
4,883,298	+				+0.5
4,883,298	+				+0.3
4,883,299	-				+0.8
4,883,299	-				-1.1
4,883,299	-				-0.1
4,883,344	+				-0.1
4,883,367	+				+1.5
4,883,367	+				-1.7
4,883,367	+				-1.3
4,883,368	-				+0.5
4,883,368	-				+0.5
4,883,368	-				+0.1
4,883,375	+				+0.9
4,883,375	+				+0.7
4,883,375	+				-1.1
4,883,376	-				-0.5
4,883,390	-				+1.0
4,883,400	+				-0.5
4,883,400	+				-0.1
4,883,400	+				+0.9
4,883,400	+				-0.5
4,883,400	+				+1.5
4,883,400	+				+0.5
4,883,400	+				-0.1
4,883,400	+				+0.5
4,883,401	-				+0.1
4,883,401	-				-0.1
4,883,401	-				+1.0
4,883,441	+				-0.5
4,883,441	+				+1.5
4,883,441	+				+2.5
4,883,441	+				-0.1
4,883,441	+				-1.5
4,883,441	+				-1.7
4,883,441	+				-0.1
4,883,441	+				-1.3
4,883,441	+				+0.5
4,883,441	+				-0.3
4,883,441	+				-0.1
4,883,441	+				+1.2
4,883,441	+				+0.8
4,883,441	+				-0.8
4,883,442	-				-0.4
4,883,442	-				+0.5
4,883,442	-				+1.2
4,883,442	-				-0.9
4,883,442	-				+0.3
4,883,442	-				-1.2
4,883,442	-				-1.5
4,883,442	-				-1.7
4,883,442	-				-0.5
4,883,442	-				+0.5
4,883,442	-				+0.7
4,883,442	-				+2.4
4,883,442	-				+0.6
4,883,445	+				-0.8
4,883,445	+				-0.8
4,883,446	-				+0.7
4,883,446	-				+0.5
4,883,446	-				+0.5
4,883,446	-				+0.1
4,883,446	-				-0.1
4,883,446	-				-2.4
4,883,446	-				-0.3
4,883,498	+				+0.2
4,883,514	+				+0.8
4,883,515	-				+0.4
4,883,738	+		PFLU_RS21670	0.20	-0.2
4,883,738	+		PFLU_RS21670	0.20	-0.1
4,883,738	+		PFLU_RS21670	0.20	+1.1
4,883,738	+		PFLU_RS21670	0.20	+0.3
4,883,738	+		PFLU_RS21670	0.20	+1.2
4,883,738	+		PFLU_RS21670	0.20	+0.9
4,883,738	+		PFLU_RS21670	0.20	-0.5
4,883,738	+		PFLU_RS21670	0.20	+0.2
4,883,738	+		PFLU_RS21670	0.20	-0.8
4,883,738	+		PFLU_RS21670	0.20	-1.9
4,883,738	+		PFLU_RS21670	0.20	-0.5
4,883,739	-		PFLU_RS21670	0.20	+0.3
4,883,739	-		PFLU_RS21670	0.20	-0.7
4,883,739	-		PFLU_RS21670	0.20	+1.5
4,883,739	-		PFLU_RS21670	0.20	-0.3
4,883,739	-		PFLU_RS21670	0.20	+0.4
4,883,739	-		PFLU_RS21670	0.20	-0.8
4,883,739	-		PFLU_RS21670	0.20	+0.8
4,883,739	-		PFLU_RS21670	0.20	+0.1
4,883,739	-		PFLU_RS21670	0.20	+0.9
4,883,739	-		PFLU_RS21670	0.20	+0.8
4,883,739	-		PFLU_RS21670	0.20	+0.1
4,883,758	-		PFLU_RS21670	0.22	+0.5
4,883,795	+		PFLU_RS21670	0.25	-0.2
4,883,795	+		PFLU_RS21670	0.25	+1.5
4,883,959	+		PFLU_RS21670	0.37	+0.5
4,883,959	+		PFLU_RS21670	0.37	+0.5
4,883,959	+		PFLU_RS21670	0.37	-0.5
4,883,959	+		PFLU_RS21670	0.37	+0.5
4,883,959	+		PFLU_RS21670	0.37	+0.3
4,883,959	+		PFLU_RS21670	0.37	+0.5
4,883,960	-		PFLU_RS21670	0.37	+1.2
4,883,960	-		PFLU_RS21670	0.37	+3.5
4,883,960	-		PFLU_RS21670	0.37	+0.6
4,883,960	-		PFLU_RS21670	0.37	-0.1
4,883,960	-		PFLU_RS21670	0.37	+1.0
4,884,012	-		PFLU_RS21670	0.41	+0.6
4,884,012	-		PFLU_RS21670	0.41	+0.4
4,884,036	+		PFLU_RS21670	0.43	+0.5
4,884,036	+		PFLU_RS21670	0.43	-0.5
4,884,037	-		PFLU_RS21670	0.43	-0.4
4,884,050	+		PFLU_RS21670	0.44	-0.5
4,884,051	-		PFLU_RS21670	0.44	+1.2
4,884,062	+		PFLU_RS21670	0.45	-1.2
4,884,062	+		PFLU_RS21670	0.45	+0.7
4,884,062	+		PFLU_RS21670	0.45	+0.9
4,884,062	+		PFLU_RS21670	0.45	-1.8
4,884,062	+		PFLU_RS21670	0.45	-1.1
4,884,062	+		PFLU_RS21670	0.45	-0.3
4,884,062	+		PFLU_RS21670	0.45	-0.2
4,884,062	+		PFLU_RS21670	0.45	+2.2
4,884,062	+		PFLU_RS21670	0.45	+0.8
4,884,062	+		PFLU_RS21670	0.45	+0.7
4,884,062	+		PFLU_RS21670	0.45	+2.5
4,884,062	+		PFLU_RS21670	0.45	+0.8
4,884,062	+		PFLU_RS21670	0.45	-0.5
4,884,062	+		PFLU_RS21670	0.45	-0.1
4,884,063	-		PFLU_RS21670	0.45	+0.5
4,884,063	-		PFLU_RS21670	0.45	+1.8
4,884,063	-		PFLU_RS21670	0.45	+0.6
4,884,063	-		PFLU_RS21670	0.45	+0.2
4,884,063	-		PFLU_RS21670	0.45	+0.2
4,884,063	-		PFLU_RS21670	0.45	+0.5
4,884,063	-		PFLU_RS21670	0.45	+0.9
4,884,063	-		PFLU_RS21670	0.45	+1.1
4,884,063	-		PFLU_RS21670	0.45	+0.5
4,884,063	-		PFLU_RS21670	0.45	+0.2
4,884,063	-		PFLU_RS21670	0.45	+0.5
4,884,063	-		PFLU_RS21670	0.45	-0.1
4,884,063	-		PFLU_RS21670	0.45	+0.1
4,884,063	-		PFLU_RS21670	0.45	+1.3
4,884,063	-		PFLU_RS21670	0.45	+0.4
4,884,063	-		PFLU_RS21670	0.45	+1.1
4,884,063	-		PFLU_RS21670	0.45	+1.4
4,884,063	-		PFLU_RS21670	0.45	+0.5
4,884,063	-		PFLU_RS21670	0.45	-0.9
4,884,063	-		PFLU_RS21670	0.45	+0.1
4,884,063	-		PFLU_RS21670	0.45	+1.5