Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS10405

Experiment: Glucose (C) and Betaine (N); with MOPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Betaine (N); with MOPS; with chloride
2,294,153	+		PFLU_RS10395	0.29	+1.1
2,294,154	-		PFLU_RS10395	0.29	-0.2
2,294,154	-		PFLU_RS10395	0.29	-2.7
2,294,154	-		PFLU_RS10395	0.29	+0.8
2,294,162	+		PFLU_RS10395	0.30	-0.2
2,294,162	+		PFLU_RS10395	0.30	+0.7
2,294,162	+		PFLU_RS10395	0.30	-1.9
2,294,162	+		PFLU_RS10395	0.30	+1.3
2,294,163	-		PFLU_RS10395	0.30	+1.0
2,294,163	-		PFLU_RS10395	0.30	-0.8
2,294,186	+		PFLU_RS10395	0.34	-1.2
2,294,216	+		PFLU_RS10395	0.39	-0.9
2,294,216	+		PFLU_RS10395	0.39	+0.5
2,294,216	+		PFLU_RS10395	0.39	-0.5
2,294,383	+		PFLU_RS10395	0.65	+0.7
2,294,383	+		PFLU_RS10395	0.65	+0.5
2,294,603	+				+0.7
2,294,604	-				+2.1
2,294,627	+				-1.0
2,294,627	+				+1.5
2,294,627	+				-0.1
2,294,627	+				+0.2
2,294,627	+				-0.2
2,294,627	+				-0.0
2,294,627	+				+0.9
2,294,627	+				+1.1
2,294,627	+				-0.1
2,294,627	+				+0.6
2,294,627	+				-0.9
2,294,627	+				+0.6
2,294,627	+				-0.2
2,294,627	+				+0.9
2,294,627	+				-1.0
2,294,627	+				+1.5
2,294,627	+				+0.6
2,294,627	+				-1.8
2,294,627	+				-1.2
2,294,628	-				+0.2
2,294,628	-				-2.1
2,294,628	-				-0.5
2,294,628	-				+1.3
2,294,628	-				-1.5
2,294,628	-				-0.2
2,294,628	-				-1.5
2,294,628	-				+0.3
2,294,628	-				+0.1
2,294,628	-				-0.4
2,294,628	-				+0.0
2,294,628	-				+0.1
2,294,628	-				-2.4
2,294,628	-				+0.8
2,294,628	-				-2.1
2,294,628	-				-1.0
2,294,628	-				+0.3
2,294,628	-				+1.3
2,294,628	-				-0.2
2,294,628	-				+0.4
2,294,628	-				-0.1
2,294,629	+				+1.1
2,294,630	-				+1.1
2,294,672	+		PFLU_RS10400	0.12	+0.1
2,294,672	+		PFLU_RS10400	0.12	-1.1
2,294,672	+		PFLU_RS10400	0.12	+0.1
2,294,672	+		PFLU_RS10400	0.12	-0.1
2,294,672	+		PFLU_RS10400	0.12	+1.1
2,294,687	+		PFLU_RS10400	0.14	+0.3
2,294,724	-		PFLU_RS10400	0.20	-0.2
2,294,868	+		PFLU_RS10400	0.45	-1.0
2,294,868	+		PFLU_RS10400	0.45	+2.0
2,294,868	+		PFLU_RS10400	0.45	+0.9
2,294,868	+		PFLU_RS10400	0.45	+1.2
2,294,869	-		PFLU_RS10400	0.45	-0.5
2,294,869	-		PFLU_RS10400	0.45	-0.9
2,294,869	-		PFLU_RS10400	0.45	-0.1
2,294,869	-		PFLU_RS10400	0.45	+0.3
2,294,905	+		PFLU_RS10400	0.51	-1.0
2,294,905	+		PFLU_RS10400	0.51	+0.9
2,294,906	-		PFLU_RS10400	0.51	-1.8
2,294,906	-		PFLU_RS10400	0.51	+1.2
2,294,933	+		PFLU_RS10400	0.55	-2.0
2,294,934	-		PFLU_RS10400	0.56	+0.3
2,294,978	+		PFLU_RS10400	0.63	-0.2
2,294,978	+		PFLU_RS10400	0.63	+2.9
2,294,978	+		PFLU_RS10400	0.63	-2.7
2,294,979	-		PFLU_RS10400	0.63	+1.1
2,294,979	-		PFLU_RS10400	0.63	+1.5
2,294,987	+		PFLU_RS10400	0.64	-1.2
2,295,160	+				+0.8
2,295,249	+		PFLU_RS10405	0.88	+0.3
2,295,249	+		PFLU_RS10405	0.88	+0.0
2,295,250	-		PFLU_RS10405	0.88	-0.7
2,295,250	-		PFLU_RS10405	0.88	-0.6
2,295,250	-		PFLU_RS10405	0.88	-0.9
2,295,250	-		PFLU_RS10405	0.88	-1.2
2,295,250	-		PFLU_RS10405	0.88	-2.0
2,295,337	+		PFLU_RS10410	0.18	+0.7
2,295,338	-		PFLU_RS10410	0.18	+0.8
2,295,338	-		PFLU_RS10410	0.18	-0.7
2,295,338	-		PFLU_RS10410	0.18	+1.3
2,295,381	+		PFLU_RS10410	0.30	-1.5
2,295,382	-		PFLU_RS10410	0.30	+0.2
2,295,484	+		PFLU_RS10410	0.57	-1.8
2,295,485	-		PFLU_RS10410	0.58	+1.6
2,295,515	+		PFLU_RS10410	0.66	+0.6
2,295,515	+		PFLU_RS10410	0.66	+0.3
2,295,564	+		PFLU_RS10410	0.79	+0.8
2,295,564	+		PFLU_RS10410	0.79	-0.2
2,295,564	+		PFLU_RS10410	0.79	-1.5
2,295,564	+		PFLU_RS10410	0.79	+0.1
2,295,564	+		PFLU_RS10410	0.79	+0.6
2,295,564	+		PFLU_RS10410	0.79	+0.5
2,295,565	-		PFLU_RS10410	0.79	-0.1
2,295,565	-		PFLU_RS10410	0.79	+1.6
2,295,565	-		PFLU_RS10410	0.79	-1.0
2,295,565	-		PFLU_RS10410	0.79	+1.3
2,295,565	-		PFLU_RS10410	0.79	+0.5
2,295,565	-		PFLU_RS10410	0.79	-0.7
2,295,565	-		PFLU_RS10410	0.79	-0.4
2,295,565	-		PFLU_RS10410	0.79	-1.7
2,295,565	-		PFLU_RS10410	0.79	-0.2
2,295,565	-		PFLU_RS10410	0.79	-0.4
2,295,565	-		PFLU_RS10410	0.79	-0.7
2,295,594	+		PFLU_RS10410	0.87	-0.6
2,295,594	+		PFLU_RS10410	0.87	+0.1
2,295,594	+		PFLU_RS10410	0.87	-0.5
2,295,594	+		PFLU_RS10410	0.87	+0.9
2,295,594	+		PFLU_RS10410	0.87	+0.5
2,295,594	+		PFLU_RS10410	0.87	-1.0
2,295,594	+		PFLU_RS10410	0.87	+0.9
2,295,594	+		PFLU_RS10410	0.87	+0.5
2,295,594	+		PFLU_RS10410	0.87	+0.5
2,295,594	+		PFLU_RS10410	0.87	-3.1
2,295,594	+		PFLU_RS10410	0.87	-1.7
2,295,594	+		PFLU_RS10410	0.87	-0.7
2,295,594	+		PFLU_RS10410	0.87	+1.3
2,295,594	+		PFLU_RS10410	0.87	-0.8
2,295,594	+		PFLU_RS10410	0.87	-0.7
2,295,594	+		PFLU_RS10410	0.87	+0.0
2,295,595	-		PFLU_RS10410	0.87	+3.9
2,295,595	-		PFLU_RS10410	0.87	-2.7
2,295,595	-		PFLU_RS10410	0.87	-0.7
2,295,595	-		PFLU_RS10410	0.87	+0.6
2,295,595	-		PFLU_RS10410	0.87	-2.2
2,295,595	-		PFLU_RS10410	0.87	-1.2
2,295,605	+		PFLU_RS10410	0.90	+0.1
2,295,606	-				+0.3
2,295,606	-				-0.3
2,295,659	+				-0.3
2,295,660	-				-0.7
2,295,671	+				-0.1
2,295,672	-				-0.1
2,295,672	-				+0.7
2,295,710	-				+1.3
2,295,783	+				-2.7
2,295,783	+				-0.7
2,295,784	-				+1.3
2,295,784	-				+0.3
2,295,784	-				+0.8
2,295,784	-				-0.2
2,295,918	+		PFLU_RS10415	0.41	+0.1
2,295,918	+		PFLU_RS10415	0.41	-0.6
2,295,918	+		PFLU_RS10415	0.41	+0.2
2,295,918	+		PFLU_RS10415	0.41	-0.2
2,295,918	+		PFLU_RS10415	0.41	+1.3
2,295,918	+		PFLU_RS10415	0.41	-0.5
2,295,919	-		PFLU_RS10415	0.42	+1.0
2,295,919	-		PFLU_RS10415	0.42	+1.0
2,295,919	-		PFLU_RS10415	0.42	-1.0
2,295,919	-		PFLU_RS10415	0.42	-0.7
2,295,939	+		PFLU_RS10415	0.47	+0.3
2,295,939	+		PFLU_RS10415	0.47	+0.3
2,295,939	+		PFLU_RS10415	0.47	+1.3
2,295,939	+		PFLU_RS10415	0.47	+0.4
2,295,940	-		PFLU_RS10415	0.48	+0.6
2,295,940	-		PFLU_RS10415	0.48	-0.7
2,295,940	-		PFLU_RS10415	0.48	-0.2
2,296,060	+		PFLU_RS10415	0.81	-0.1
2,296,105	+				-0.2
2,296,105	+				-0.9
2,296,106	-				+1.0
2,296,207	+				-1.9
2,296,207	+				+0.7
2,296,207	+				+0.3
2,296,207	+				+0.8
2,296,208	-				-0.7
2,296,208	-				+0.3
2,296,208	-				+0.9
2,296,208	-				+0.1
2,296,208	-				+1.3
2,296,209	+				+0.1
2,296,209	+				+0.6
2,296,209	+				-0.5
2,296,209	+				+0.5
2,296,209	+				+2.2
2,296,209	+				-2.2
2,296,209	+				+0.0
2,296,209	+				-1.1
2,296,209	+				-0.2
2,296,209	+				-1.2
2,296,209	+				+0.5
2,296,209	+				+0.4
2,296,209	+				+1.8
2,296,209	+				+1.2
2,296,209	+				-1.6
2,296,209	+				-1.0
2,296,209	+				-0.1
2,296,210	-				+2.1
2,296,210	-				-0.2
2,296,210	-				+1.3
2,296,210	-				+0.3
2,296,210	-				+0.3
2,296,210	-				-0.8
2,296,210	-				-1.8
2,296,210	-				-1.6
2,296,210	-				+0.6
2,296,210	-				-1.8
2,296,210	-				+0.6
2,296,210	-				+0.3
2,296,210	-				-0.2
2,296,210	-				-0.5
2,296,210	-				-0.2
2,296,210	-				-0.7
2,296,210	-				-0.7
2,296,210	-				+0.8
2,296,210	-				+0.6
2,296,210	-				-0.2
2,296,210	-				+0.5
2,296,210	-				+0.8
2,296,210	-				-0.7
2,296,210	-				+0.4
2,296,213	+				-1.0
2,296,213	+				-0.2
2,296,213	+				+2.0
2,296,213	+				+0.2
2,296,213	+				-0.9
2,296,213	+				+0.8
2,296,213	+				+1.9
2,296,213	+				+0.1
2,296,213	+				-1.5
2,296,213	+				-0.5
2,296,214	-				+0.8
2,296,214	-				+0.8
2,296,214	-				+1.6
2,296,214	-				-0.2
2,296,214	-				+0.5
2,296,214	-				-1.4
2,296,214	-				+1.5
2,296,214	-				-0.4
2,296,214	-				-0.5
2,296,214	-				-1.2
2,296,214	-				+0.2
2,296,214	-				-0.6
2,296,214	-				-0.0
2,296,214	-				-0.2
2,296,214	-				+1.6
2,296,217	+				-0.8
2,296,217	+				+0.3
2,296,217	+				+1.7
2,296,217	+				-1.2
2,296,218	-				+0.3
2,296,218	-				-0.5