Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15350

Experiment: Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS15345 and BWI76_RS15350 are separated by 149 nucleotidesBWI76_RS15350 and BWI76_RS15355 are separated by 67 nucleotides BWI76_RS15345: BWI76_RS15345 - 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase, at 3,214,024 to 3,215,127 _RS15345 BWI76_RS15350: BWI76_RS15350 - hypothetical protein, at 3,215,277 to 3,215,669 _RS15350 BWI76_RS15355: BWI76_RS15355 - transcriptional regulator FtrA, at 3,215,737 to 3,216,747 _RS15355 Position (kb) 3215 3216Strain fitness (log2 ratio) -2 -1 0 1at 3214.451 kb on + strand, within BWI76_RS15345at 3214.489 kb on + strand, within BWI76_RS15345at 3214.554 kb on - strand, within BWI76_RS15345at 3214.844 kb on - strand, within BWI76_RS15345at 3215.104 kb on + strandat 3215.295 kb on + strandat 3215.297 kb on - strandat 3215.303 kb on - strandat 3215.354 kb on - strand, within BWI76_RS15350at 3216.042 kb on + strand, within BWI76_RS15355at 3216.052 kb on + strand, within BWI76_RS15355at 3216.220 kb on + strand, within BWI76_RS15355at 3216.228 kb on - strand, within BWI76_RS15355at 3216.510 kb on - strand, within BWI76_RS15355at 3216.603 kb on - strand, within BWI76_RS15355at 3216.604 kb on - strand, within BWI76_RS15355at 3216.609 kb on - strandat 3216.617 kb on + strandat 3216.617 kb on + strand, within BWI76_RS15355at 3216.625 kb on - strand, within BWI76_RS15355at 3216.625 kb on - strand, within BWI76_RS15355at 3216.625 kb on - strand, within BWI76_RS15355at 3216.654 kb on + strandat 3216.669 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM
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3,214,451 + BWI76_RS15345 0.39 -0.6
3,214,489 + BWI76_RS15345 0.42 -2.4
3,214,554 - BWI76_RS15345 0.48 -1.1
3,214,844 - BWI76_RS15345 0.74 +0.1
3,215,104 + +0.2
3,215,295 + +0.4
3,215,297 - -0.1
3,215,303 - +0.8
3,215,354 - BWI76_RS15350 0.20 +1.1
3,216,042 + BWI76_RS15355 0.30 +0.7
3,216,052 + BWI76_RS15355 0.31 +1.3
3,216,220 + BWI76_RS15355 0.48 -1.6
3,216,228 - BWI76_RS15355 0.49 +0.1
3,216,510 - BWI76_RS15355 0.76 +0.2
3,216,603 - BWI76_RS15355 0.86 +0.4
3,216,604 - BWI76_RS15355 0.86 +1.0
3,216,609 - -2.2
3,216,617 + +1.0
3,216,617 + BWI76_RS15355 0.87 +0.8
3,216,625 - BWI76_RS15355 0.88 +1.2
3,216,625 - BWI76_RS15355 0.88 +0.6
3,216,625 - BWI76_RS15355 0.88 +0.6
3,216,654 + -2.7
3,216,669 - +1.1

Or see this region's nucleotide sequence