Experiment: Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11550 and BWI76_RS11555 are separated by 4 nucleotides BWI76_RS11555 and BWI76_RS11560 are separated by 9 nucleotides BWI76_RS11560 and BWI76_RS11565 are separated by 136 nucleotides
BWI76_RS11550: BWI76_RS11550 - hypothetical protein, at 2,430,200 to 2,431,036
_RS11550
BWI76_RS11555: BWI76_RS11555 - kinase, at 2,431,041 to 2,431,988
_RS11555
BWI76_RS11560: BWI76_RS11560 - oxidoreductase, at 2,431,998 to 2,432,981
_RS11560
BWI76_RS11565: BWI76_RS11565 - DeoR family transcriptional regulator, at 2,433,118 to 2,433,876
_RS11565
Position (kb)
2431
2432
2433 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2431.009 kb on + strand at 2431.009 kb on + strand at 2431.043 kb on + strand at 2431.051 kb on - strand at 2431.144 kb on + strand, within BWI76_RS11555 at 2431.154 kb on + strand, within BWI76_RS11555 at 2431.156 kb on + strand, within BWI76_RS11555 at 2431.164 kb on - strand, within BWI76_RS11555 at 2431.164 kb on - strand, within BWI76_RS11555 at 2431.164 kb on - strand, within BWI76_RS11555 at 2431.215 kb on + strand, within BWI76_RS11555 at 2431.215 kb on + strand, within BWI76_RS11555 at 2431.215 kb on + strand, within BWI76_RS11555 at 2431.215 kb on + strand, within BWI76_RS11555 at 2431.215 kb on + strand, within BWI76_RS11555 at 2431.215 kb on + strand, within BWI76_RS11555 at 2431.215 kb on + strand, within BWI76_RS11555 at 2431.215 kb on + strand, within BWI76_RS11555 at 2431.215 kb on + strand, within BWI76_RS11555 at 2431.223 kb on - strand, within BWI76_RS11555 at 2431.223 kb on - strand, within BWI76_RS11555 at 2431.223 kb on - strand, within BWI76_RS11555 at 2431.223 kb on - strand, within BWI76_RS11555 at 2431.223 kb on - strand, within BWI76_RS11555 at 2431.223 kb on - strand, within BWI76_RS11555 at 2431.223 kb on - strand, within BWI76_RS11555 at 2431.241 kb on - strand, within BWI76_RS11555 at 2431.268 kb on + strand, within BWI76_RS11555 at 2431.270 kb on + strand at 2431.333 kb on + strand, within BWI76_RS11555 at 2431.338 kb on + strand, within BWI76_RS11555 at 2431.338 kb on + strand, within BWI76_RS11555 at 2431.338 kb on + strand, within BWI76_RS11555 at 2431.338 kb on + strand, within BWI76_RS11555 at 2431.346 kb on - strand, within BWI76_RS11555 at 2431.346 kb on - strand, within BWI76_RS11555 at 2431.347 kb on - strand, within BWI76_RS11555 at 2431.392 kb on - strand, within BWI76_RS11555 at 2431.447 kb on - strand, within BWI76_RS11555 at 2431.447 kb on - strand, within BWI76_RS11555 at 2431.488 kb on + strand, within BWI76_RS11555 at 2431.518 kb on + strand, within BWI76_RS11555 at 2431.530 kb on + strand, within BWI76_RS11555 at 2431.538 kb on + strand, within BWI76_RS11555 at 2431.584 kb on - strand, within BWI76_RS11555 at 2431.584 kb on - strand, within BWI76_RS11555 at 2431.591 kb on - strand, within BWI76_RS11555 at 2431.601 kb on + strand, within BWI76_RS11555 at 2431.672 kb on + strand, within BWI76_RS11555 at 2431.763 kb on - strand, within BWI76_RS11555 at 2431.850 kb on + strand, within BWI76_RS11555 at 2431.850 kb on + strand, within BWI76_RS11555 at 2431.858 kb on - strand, within BWI76_RS11555 at 2431.858 kb on - strand, within BWI76_RS11555 at 2431.900 kb on - strand at 2431.983 kb on + strand at 2432.005 kb on - strand at 2432.079 kb on + strand at 2432.156 kb on - strand at 2432.285 kb on + strand, within BWI76_RS11560 at 2432.368 kb on + strand, within BWI76_RS11560 at 2432.535 kb on + strand, within BWI76_RS11560 at 2432.596 kb on + strand, within BWI76_RS11560 at 2432.614 kb on + strand, within BWI76_RS11560 at 2432.659 kb on + strand, within BWI76_RS11560 at 2432.667 kb on - strand, within BWI76_RS11560 at 2432.864 kb on - strand, within BWI76_RS11560 at 2432.974 kb on + strand at 2432.974 kb on - strand at 2432.985 kb on + strand at 2433.109 kb on + strand at 2433.243 kb on + strand, within BWI76_RS11565 at 2433.250 kb on + strand, within BWI76_RS11565 at 2433.286 kb on + strand, within BWI76_RS11565 at 2433.286 kb on + strand, within BWI76_RS11565 at 2433.286 kb on + strand, within BWI76_RS11565 at 2433.286 kb on + strand, within BWI76_RS11565 at 2433.286 kb on + strand, within BWI76_RS11565 at 2433.331 kb on + strand, within BWI76_RS11565 at 2433.415 kb on + strand, within BWI76_RS11565 at 2433.417 kb on + strand, within BWI76_RS11565 at 2433.425 kb on + strand, within BWI76_RS11565 at 2433.475 kb on + strand, within BWI76_RS11565 at 2433.480 kb on + strand, within BWI76_RS11565 at 2433.490 kb on + strand at 2433.500 kb on + strand, within BWI76_RS11565 at 2433.542 kb on + strand, within BWI76_RS11565 at 2433.625 kb on + strand, within BWI76_RS11565 at 2433.632 kb on + strand, within BWI76_RS11565 at 2433.632 kb on + strand, within BWI76_RS11565 at 2433.640 kb on + strand, within BWI76_RS11565 at 2433.640 kb on + strand, within BWI76_RS11565 at 2433.649 kb on + strand, within BWI76_RS11565 at 2433.649 kb on + strand, within BWI76_RS11565 at 2433.656 kb on + strand, within BWI76_RS11565 at 2433.661 kb on + strand, within BWI76_RS11565 at 2433.666 kb on + strand, within BWI76_RS11565 at 2433.667 kb on + strand, within BWI76_RS11565 at 2433.668 kb on + strand, within BWI76_RS11565 at 2433.735 kb on + strand, within BWI76_RS11565 at 2433.756 kb on + strand, within BWI76_RS11565 at 2433.763 kb on + strand, within BWI76_RS11565 at 2433.763 kb on + strand, within BWI76_RS11565 at 2433.816 kb on + strand at 2433.824 kb on + strand at 2433.828 kb on + strand at 2433.833 kb on + strand at 2433.918 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM remove 2,431,009 + +0.1 2,431,009 + -0.2 2,431,043 + +1.3 2,431,051 - -0.3 2,431,144 + BWI76_RS11555 0.11 +0.8 2,431,154 + BWI76_RS11555 0.12 -1.6 2,431,156 + BWI76_RS11555 0.12 -1.5 2,431,164 - BWI76_RS11555 0.13 -2.1 2,431,164 - BWI76_RS11555 0.13 -1.3 2,431,164 - BWI76_RS11555 0.13 -0.3 2,431,215 + BWI76_RS11555 0.18 +1.3 2,431,215 + BWI76_RS11555 0.18 +0.2 2,431,215 + BWI76_RS11555 0.18 -2.2 2,431,215 + BWI76_RS11555 0.18 +1.7 2,431,215 + BWI76_RS11555 0.18 +0.5 2,431,215 + BWI76_RS11555 0.18 +1.1 2,431,215 + BWI76_RS11555 0.18 +0.9 2,431,215 + BWI76_RS11555 0.18 +0.4 2,431,215 + BWI76_RS11555 0.18 +0.6 2,431,223 - BWI76_RS11555 0.19 -2.3 2,431,223 - BWI76_RS11555 0.19 -1.4 2,431,223 - BWI76_RS11555 0.19 -0.5 2,431,223 - BWI76_RS11555 0.19 +0.2 2,431,223 - BWI76_RS11555 0.19 -0.3 2,431,223 - BWI76_RS11555 0.19 +1.2 2,431,223 - BWI76_RS11555 0.19 -1.0 2,431,241 - BWI76_RS11555 0.21 +0.1 2,431,268 + BWI76_RS11555 0.24 -0.2 2,431,270 + +1.1 2,431,333 + BWI76_RS11555 0.31 -0.8 2,431,338 + BWI76_RS11555 0.31 +0.3 2,431,338 + BWI76_RS11555 0.31 -0.6 2,431,338 + BWI76_RS11555 0.31 +0.6 2,431,338 + BWI76_RS11555 0.31 +1.6 2,431,346 - BWI76_RS11555 0.32 -2.9 2,431,346 - BWI76_RS11555 0.32 +1.1 2,431,347 - BWI76_RS11555 0.32 +1.5 2,431,392 - BWI76_RS11555 0.37 -3.2 2,431,447 - BWI76_RS11555 0.43 +1.1 2,431,447 - BWI76_RS11555 0.43 -1.8 2,431,488 + BWI76_RS11555 0.47 +1.4 2,431,518 + BWI76_RS11555 0.50 +1.5 2,431,530 + BWI76_RS11555 0.52 +0.1 2,431,538 + BWI76_RS11555 0.52 +0.1 2,431,584 - BWI76_RS11555 0.57 +0.1 2,431,584 - BWI76_RS11555 0.57 -3.2 2,431,591 - BWI76_RS11555 0.58 +0.3 2,431,601 + BWI76_RS11555 0.59 +0.5 2,431,672 + BWI76_RS11555 0.67 +0.8 2,431,763 - BWI76_RS11555 0.76 +1.5 2,431,850 + BWI76_RS11555 0.85 +1.7 2,431,850 + BWI76_RS11555 0.85 -1.4 2,431,858 - BWI76_RS11555 0.86 -0.9 2,431,858 - BWI76_RS11555 0.86 +0.2 2,431,900 - +1.5 2,431,983 + -0.0 2,432,005 - +1.5 2,432,079 + +0.2 2,432,156 - -0.5 2,432,285 + BWI76_RS11560 0.29 +0.7 2,432,368 + BWI76_RS11560 0.38 +1.7 2,432,535 + BWI76_RS11560 0.55 +0.8 2,432,596 + BWI76_RS11560 0.61 +1.7 2,432,614 + BWI76_RS11560 0.63 -0.5 2,432,659 + BWI76_RS11560 0.67 +0.3 2,432,667 - BWI76_RS11560 0.68 +0.6 2,432,864 - BWI76_RS11560 0.88 +1.2 2,432,974 + +0.6 2,432,974 - -0.3 2,432,985 + -0.7 2,433,109 + -1.7 2,433,243 + BWI76_RS11565 0.16 -0.8 2,433,250 + BWI76_RS11565 0.17 +0.4 2,433,286 + BWI76_RS11565 0.22 -1.0 2,433,286 + BWI76_RS11565 0.22 -0.2 2,433,286 + BWI76_RS11565 0.22 -0.1 2,433,286 + BWI76_RS11565 0.22 -1.7 2,433,286 + BWI76_RS11565 0.22 -0.7 2,433,331 + BWI76_RS11565 0.28 -4.2 2,433,415 + BWI76_RS11565 0.39 -0.8 2,433,417 + BWI76_RS11565 0.39 -0.1 2,433,425 + BWI76_RS11565 0.40 -0.1 2,433,475 + BWI76_RS11565 0.47 -1.7 2,433,480 + BWI76_RS11565 0.48 -2.6 2,433,490 + +1.1 2,433,500 + BWI76_RS11565 0.50 +0.1 2,433,542 + BWI76_RS11565 0.56 -1.9 2,433,625 + BWI76_RS11565 0.67 -2.1 2,433,632 + BWI76_RS11565 0.68 +0.1 2,433,632 + BWI76_RS11565 0.68 +1.1 2,433,640 + BWI76_RS11565 0.69 +1.1 2,433,640 + BWI76_RS11565 0.69 +1.1 2,433,649 + BWI76_RS11565 0.70 +1.3 2,433,649 + BWI76_RS11565 0.70 -2.0 2,433,656 + BWI76_RS11565 0.71 +2.1 2,433,661 + BWI76_RS11565 0.72 -2.8 2,433,666 + BWI76_RS11565 0.72 +2.0 2,433,667 + BWI76_RS11565 0.72 +0.7 2,433,668 + BWI76_RS11565 0.72 +1.1 2,433,735 + BWI76_RS11565 0.81 -1.4 2,433,756 + BWI76_RS11565 0.84 -0.7 2,433,763 + BWI76_RS11565 0.85 -1.1 2,433,763 + BWI76_RS11565 0.85 -1.5 2,433,816 + -1.5 2,433,824 + -2.2 2,433,828 + -1.5 2,433,833 + -1.7 2,433,918 + -1.3
Or see this region's nucleotide sequence