Experiment: Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04845 and BWI76_RS04850 are separated by 194 nucleotides BWI76_RS04850 and BWI76_RS04855 are separated by 9 nucleotides BWI76_RS04855 and BWI76_RS04860 are separated by 31 nucleotides
BWI76_RS04845: BWI76_RS04845 - nicotinate-nucleotide pyrophosphorylase, at 1,012,016 to 1,012,909
_RS04845
BWI76_RS04850: BWI76_RS04850 - N-acetylmuramoyl-L-alanine amidase, at 1,013,104 to 1,013,655
_RS04850
BWI76_RS04855: BWI76_RS04855 - regulatory protein AmpE, at 1,013,665 to 1,014,519
_RS04855
BWI76_RS04860: BWI76_RS04860 - alpha-N-arabinofuranosidase, at 1,014,551 to 1,015,501
_RS04860
Position (kb) 1013
1014 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 1012.194 kb on - strand, within BWI76_RS04845 at 1012.418 kb on + strand, within BWI76_RS04845 at 1012.426 kb on - strand, within BWI76_RS04845 at 1012.802 kb on + strand, within BWI76_RS04845 at 1012.802 kb on + strand, within BWI76_RS04845 at 1012.810 kb on - strand, within BWI76_RS04845 at 1013.094 kb on - strand at 1013.256 kb on + strand, within BWI76_RS04850 at 1013.368 kb on + strand, within BWI76_RS04850 at 1013.398 kb on + strand, within BWI76_RS04850 at 1013.472 kb on + strand, within BWI76_RS04850 at 1013.514 kb on - strand at 1013.613 kb on - strand at 1013.675 kb on + strand at 1013.681 kb on - strand at 1013.708 kb on + strand at 1013.716 kb on - strand at 1013.716 kb on - strand at 1013.760 kb on - strand, within BWI76_RS04855 at 1013.784 kb on + strand, within BWI76_RS04855 at 1013.844 kb on + strand, within BWI76_RS04855 at 1013.904 kb on + strand, within BWI76_RS04855 at 1013.904 kb on - strand, within BWI76_RS04855 at 1013.917 kb on + strand at 1014.080 kb on - strand, within BWI76_RS04855 at 1014.278 kb on + strand, within BWI76_RS04855 at 1014.395 kb on - strand, within BWI76_RS04855
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM remove 1,012,194 - BWI76_RS04845 0.20 -4.9 1,012,418 + BWI76_RS04845 0.45 -3.6 1,012,426 - BWI76_RS04845 0.46 -3.1 1,012,802 + BWI76_RS04845 0.88 -3.9 1,012,802 + BWI76_RS04845 0.88 -2.8 1,012,810 - BWI76_RS04845 0.89 -2.7 1,013,094 - +0.2 1,013,256 + BWI76_RS04850 0.28 +0.2 1,013,368 + BWI76_RS04850 0.48 -0.4 1,013,398 + BWI76_RS04850 0.53 +0.3 1,013,472 + BWI76_RS04850 0.67 +0.2 1,013,514 - +1.0 1,013,613 - +1.4 1,013,675 + +0.3 1,013,681 - -3.6 1,013,708 + +0.2 1,013,716 - -1.9 1,013,716 - -0.0 1,013,760 - BWI76_RS04855 0.11 +1.1 1,013,784 + BWI76_RS04855 0.14 +0.2 1,013,844 + BWI76_RS04855 0.21 -0.3 1,013,904 + BWI76_RS04855 0.28 -0.6 1,013,904 - BWI76_RS04855 0.28 +0.4 1,013,917 + -1.4 1,014,080 - BWI76_RS04855 0.49 -0.2 1,014,278 + BWI76_RS04855 0.72 +2.7 1,014,395 - BWI76_RS04855 0.85 -2.6
Or see this region's nucleotide sequence