Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27860 and AO356_27865 are separated by 24 nucleotides AO356_27865 and AO356_27870 are separated by 57 nucleotides AO356_27870 and AO356_27875 are separated by 228 nucleotides AO356_27875 and AO356_27880 are separated by 51 nucleotides
AO356_27860: AO356_27860 - hypothetical protein, at 6,359,339 to 6,361,078
_27860
AO356_27865: AO356_27865 - GNAT family acetyltransferase, at 6,361,103 to 6,361,597
_27865
AO356_27870: AO356_27870 - ATPase, at 6,361,655 to 6,362,776
_27870
AO356_27875: AO356_27875 - ketosteroid isomerase, at 6,363,005 to 6,363,346
_27875
AO356_27880: AO356_27880 - DNA-binding protein, at 6,363,398 to 6,364,114
_27880
Position (kb)
6361
6362
6363 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 6360.702 kb on - strand, within AO356_27860 at 6360.748 kb on + strand, within AO356_27860 at 6360.789 kb on - strand, within AO356_27860 at 6360.941 kb on - strand at 6360.999 kb on - strand at 6361.077 kb on - strand at 6361.077 kb on - strand at 6361.104 kb on + strand at 6361.105 kb on - strand at 6361.129 kb on + strand at 6361.129 kb on + strand at 6361.129 kb on + strand at 6361.129 kb on + strand at 6361.130 kb on - strand at 6361.130 kb on - strand at 6361.130 kb on - strand at 6361.252 kb on + strand, within AO356_27865 at 6361.509 kb on + strand, within AO356_27865 at 6361.557 kb on + strand at 6361.619 kb on - strand at 6361.649 kb on + strand at 6361.731 kb on + strand at 6361.731 kb on + strand at 6361.743 kb on + strand at 6361.743 kb on + strand at 6361.744 kb on - strand at 6361.744 kb on - strand at 6361.744 kb on - strand at 6361.797 kb on + strand, within AO356_27870 at 6361.797 kb on + strand, within AO356_27870 at 6361.797 kb on + strand, within AO356_27870 at 6362.311 kb on - strand, within AO356_27870 at 6362.578 kb on - strand, within AO356_27870 at 6362.628 kb on + strand, within AO356_27870 at 6362.628 kb on + strand, within AO356_27870 at 6362.629 kb on - strand, within AO356_27870 at 6362.629 kb on - strand, within AO356_27870 at 6362.809 kb on + strand at 6362.809 kb on + strand at 6362.863 kb on + strand at 6362.863 kb on + strand at 6362.863 kb on + strand at 6362.864 kb on - strand at 6362.864 kb on - strand at 6363.007 kb on - strand at 6363.058 kb on + strand, within AO356_27875 at 6363.059 kb on - strand, within AO356_27875 at 6363.060 kb on + strand, within AO356_27875 at 6363.304 kb on - strand, within AO356_27875 at 6363.349 kb on + strand at 6363.350 kb on - strand at 6363.350 kb on - strand at 6363.383 kb on + strand at 6363.383 kb on + strand at 6363.383 kb on + strand at 6363.383 kb on + strand at 6363.384 kb on - strand at 6363.384 kb on - strand at 6363.384 kb on - strand at 6363.727 kb on - strand, within AO356_27880
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Sucrose 5 mM remove 6,360,702 - AO356_27860 0.78 +0.4 6,360,748 + AO356_27860 0.81 +0.9 6,360,789 - AO356_27860 0.83 -0.5 6,360,941 - -0.6 6,360,999 - -0.1 6,361,077 - -0.7 6,361,077 - -1.4 6,361,104 + -0.3 6,361,105 - -0.3 6,361,129 + -1.1 6,361,129 + -0.2 6,361,129 + -0.1 6,361,129 + -0.3 6,361,130 - -0.2 6,361,130 - +0.4 6,361,130 - -1.1 6,361,252 + AO356_27865 0.30 +0.0 6,361,509 + AO356_27865 0.82 -0.2 6,361,557 + +0.2 6,361,619 - -0.1 6,361,649 + +0.9 6,361,731 + -0.5 6,361,731 + -0.1 6,361,743 + +2.5 6,361,743 + -0.3 6,361,744 - +0.6 6,361,744 - +1.4 6,361,744 - +0.8 6,361,797 + AO356_27870 0.13 +0.5 6,361,797 + AO356_27870 0.13 -0.2 6,361,797 + AO356_27870 0.13 -0.7 6,362,311 - AO356_27870 0.58 +1.2 6,362,578 - AO356_27870 0.82 -0.3 6,362,628 + AO356_27870 0.87 -1.9 6,362,628 + AO356_27870 0.87 +0.9 6,362,629 - AO356_27870 0.87 +0.1 6,362,629 - AO356_27870 0.87 +2.9 6,362,809 + +0.5 6,362,809 + -0.2 6,362,863 + +0.1 6,362,863 + -0.3 6,362,863 + +1.1 6,362,864 - +1.5 6,362,864 - +0.2 6,363,007 - +0.9 6,363,058 + AO356_27875 0.15 +0.3 6,363,059 - AO356_27875 0.16 -0.1 6,363,060 + AO356_27875 0.16 +1.5 6,363,304 - AO356_27875 0.87 +0.6 6,363,349 + -0.3 6,363,350 - +0.5 6,363,350 - +1.1 6,363,383 + +1.7 6,363,383 + +0.9 6,363,383 + +0.1 6,363,383 + +0.1 6,363,384 - -0.4 6,363,384 - +0.9 6,363,384 - +0.9 6,363,727 - AO356_27880 0.46 +0.2
Or see this region's nucleotide sequence