Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS23380

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
1,611,454	+		ABZR87_RS23375	0.33	-0.4
1,611,689	+		ABZR87_RS23375	0.49	+0.5
1,611,689	+		ABZR87_RS23375	0.49	+0.2
1,611,689	+		ABZR87_RS23375	0.49	-0.6
1,611,690	-		ABZR87_RS23375	0.49	+0.3
1,611,766	-		ABZR87_RS23375	0.54	+0.2
1,611,766	-		ABZR87_RS23375	0.54	-0.4
1,611,766	-		ABZR87_RS23375	0.54	+0.4
1,611,766	-		ABZR87_RS23375	0.54	-0.0
1,611,766	-		ABZR87_RS23375	0.54	-0.3
1,611,798	+		ABZR87_RS23375	0.56	+0.1
1,611,865	+		ABZR87_RS23375	0.61	+0.6
1,611,865	+		ABZR87_RS23375	0.61	+0.6
1,612,059	+		ABZR87_RS23375	0.74	+0.5
1,612,059	+		ABZR87_RS23375	0.74	+0.8
1,612,059	+		ABZR87_RS23375	0.74	-1.8
1,612,060	-		ABZR87_RS23375	0.74	-0.8
1,612,255	-		ABZR87_RS23375	0.88	-1.6
1,612,300	+				+0.3
1,612,300	+				+0.3
1,612,673	+		ABZR87_RS23380	0.51	-1.2
1,612,673	+		ABZR87_RS23380	0.51	-0.5
1,612,865	+				+0.0
1,612,865	+				+0.7
1,612,866	-				-0.3
1,612,866	-				-0.4
1,612,895	+				+0.2
1,612,895	+				+0.9
1,612,895	+				-0.0
1,612,895	+				-0.7
1,612,896	-				-0.6
1,612,896	-				-1.9
1,613,092	-				+0.2
1,613,309	+		ABZR87_RS23385	0.21	+0.2
1,613,310	-		ABZR87_RS23385	0.21	+0.5
1,613,617	+		ABZR87_RS23385	0.40	+0.5
1,613,618	-		ABZR87_RS23385	0.40	+0.3
1,613,895	+		ABZR87_RS23385	0.56	-0.4