Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS22745

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
1,461,057	+		ABZR87_RS22740	0.29	+0.1
1,461,143	+		ABZR87_RS22740	0.36	-0.7
1,461,143	+		ABZR87_RS22740	0.36	-0.5
1,461,440	+		ABZR87_RS22740	0.57	-0.7
1,461,441	-		ABZR87_RS22740	0.58	-0.7
1,461,465	-		ABZR87_RS22740	0.59	+1.1
1,461,465	-		ABZR87_RS22740	0.59	+0.6
1,461,513	+		ABZR87_RS22740	0.63	-0.0
1,461,514	-		ABZR87_RS22740	0.63	+1.5
1,461,551	+		ABZR87_RS22740	0.66	-1.6
1,461,551	+		ABZR87_RS22740	0.66	-0.8
1,461,552	-		ABZR87_RS22740	0.66	+1.1
1,461,552	-		ABZR87_RS22740	0.66	-0.5
1,461,552	-		ABZR87_RS22740	0.66	-0.0
1,461,552	-		ABZR87_RS22740	0.66	-0.3
1,461,633	+		ABZR87_RS22740	0.72	-1.3
1,461,634	-		ABZR87_RS22740	0.72	+0.4
1,461,725	+		ABZR87_RS22740	0.78	-0.4
1,461,931	-				-0.1
1,461,974	+				-0.4
1,461,975	-				-1.1
1,461,975	-				-0.1
1,461,975	-				+0.9
1,461,975	-				-0.1
1,461,975	-				+1.1
1,462,383	+		ABZR87_RS22745	0.39	+0.4
1,462,383	+		ABZR87_RS22745	0.39	-0.8
1,462,383	+		ABZR87_RS22745	0.39	+0.3
1,462,383	+		ABZR87_RS22745	0.39	+0.7
1,462,384	-		ABZR87_RS22745	0.39	-0.4
1,462,384	-		ABZR87_RS22745	0.39	-1.6
1,462,384	-		ABZR87_RS22745	0.39	-0.8
1,462,384	-		ABZR87_RS22745	0.39	+0.9
1,462,384	-		ABZR87_RS22745	0.39	+1.8
1,462,384	-		ABZR87_RS22745	0.39	-0.3
1,462,384	-		ABZR87_RS22745	0.39	-0.4
1,462,476	+		ABZR87_RS22745	0.49	-0.7
1,462,476	+		ABZR87_RS22745	0.49	-1.3
1,462,476	+		ABZR87_RS22745	0.49	+1.4
1,462,476	+		ABZR87_RS22745	0.49	+0.5
1,462,476	+		ABZR87_RS22745	0.49	+0.3
1,462,476	+		ABZR87_RS22745	0.49	-0.1
1,462,476	+		ABZR87_RS22745	0.49	-0.7
1,462,477	-		ABZR87_RS22745	0.49	-1.2
1,462,477	-		ABZR87_RS22745	0.49	+0.5
1,462,477	-		ABZR87_RS22745	0.49	+0.4
1,462,477	-		ABZR87_RS22745	0.49	-0.4
1,462,662	-		ABZR87_RS22745	0.70	-0.7
1,462,662	-		ABZR87_RS22745	0.70	-0.7
1,462,662	-		ABZR87_RS22745	0.70	-2.2
1,462,737	+		ABZR87_RS22745	0.79	-0.6
1,462,737	+		ABZR87_RS22745	0.79	-0.5
1,462,737	+		ABZR87_RS22745	0.79	+0.1
1,462,908	+				+0.5
1,462,908	+				-0.1
1,462,932	+				-0.0
1,463,351	-		ABZR87_RS22750	0.38	+0.1
1,463,848	-		ABZR87_RS22750	0.88	+0.6