Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS22370

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
1,377,556	+		ABZR87_RS22365	0.51	-1.1
1,377,557	-		ABZR87_RS22365	0.51	-0.7
1,377,557	-		ABZR87_RS22365	0.51	+0.2
1,377,658	+		ABZR87_RS22365	0.57	+1.5
1,377,658	+		ABZR87_RS22365	0.57	+0.2
1,377,658	+		ABZR87_RS22365	0.57	-1.3
1,377,658	+		ABZR87_RS22365	0.57	-2.3
1,377,659	-		ABZR87_RS22365	0.57	+0.3
1,377,659	-		ABZR87_RS22365	0.57	+0.3
1,377,659	-		ABZR87_RS22365	0.57	+0.8
1,377,659	-		ABZR87_RS22365	0.57	-0.2
1,377,712	+		ABZR87_RS22365	0.60	-0.0
1,377,760	+		ABZR87_RS22365	0.63	-0.5
1,377,761	-		ABZR87_RS22365	0.63	+0.3
1,377,796	+		ABZR87_RS22365	0.65	-0.6
1,377,796	+		ABZR87_RS22365	0.65	-0.6
1,377,796	+		ABZR87_RS22365	0.65	+0.4
1,377,796	+		ABZR87_RS22365	0.65	-0.4
1,377,797	-		ABZR87_RS22365	0.65	-1.1
1,377,797	-		ABZR87_RS22365	0.65	-0.6
1,377,797	-		ABZR87_RS22365	0.65	-0.1
1,377,797	-		ABZR87_RS22365	0.65	-0.6
1,377,848	-		ABZR87_RS22365	0.68	-0.1
1,377,866	-		ABZR87_RS22365	0.69	-0.5
1,377,985	+		ABZR87_RS22365	0.76	-1.1
1,377,985	+		ABZR87_RS22365	0.76	-0.6
1,377,986	-		ABZR87_RS22365	0.76	+0.7
1,377,986	-		ABZR87_RS22365	0.76	+0.2
1,377,986	-		ABZR87_RS22365	0.76	-1.0
1,377,986	-		ABZR87_RS22365	0.76	+0.2
1,377,986	-		ABZR87_RS22365	0.76	+0.5
1,377,986	-		ABZR87_RS22365	0.76	+0.0
1,377,986	-		ABZR87_RS22365	0.76	-0.5
1,377,986	-		ABZR87_RS22365	0.76	-0.2
1,378,013	-		ABZR87_RS22365	0.77	+0.1
1,378,013	-		ABZR87_RS22365	0.77	-0.7
1,378,016	+		ABZR87_RS22365	0.78	+0.8
1,378,016	+		ABZR87_RS22365	0.78	+0.1
1,378,016	+		ABZR87_RS22365	0.78	+0.8
1,378,016	+		ABZR87_RS22365	0.78	+0.1
1,378,016	+		ABZR87_RS22365	0.78	+0.1
1,378,017	-		ABZR87_RS22365	0.78	-0.9
1,378,017	-		ABZR87_RS22365	0.78	+0.5
1,378,017	-		ABZR87_RS22365	0.78	-2.0
1,378,017	-		ABZR87_RS22365	0.78	-0.1
1,378,180	+		ABZR87_RS22365	0.87	-0.9
1,378,180	+		ABZR87_RS22365	0.87	+0.4
1,378,394	+				-0.8
1,378,394	+				-1.3
1,378,394	+				+0.3
1,378,396	+				-0.2
1,378,396	+				+0.3
1,378,396	+				+0.1
1,378,397	-				+1.8
1,378,397	-				+0.4
1,378,397	-				-0.5
1,378,397	-				-0.6
1,378,397	-				-0.8
1,378,397	-				-0.3
1,378,397	-				+0.0
1,378,436	+				+1.2
1,378,436	+				+0.2
1,378,436	+				-0.7
1,378,437	-				-1.8
1,378,678	+		ABZR87_RS22370	0.39	-0.3
1,378,694	+		ABZR87_RS22370	0.43	-0.5
1,378,929	-				+0.2
1,378,986	+		ABZR87_RS22375	0.12	-0.4
1,378,986	+		ABZR87_RS22375	0.12	-0.1
1,378,986	+		ABZR87_RS22375	0.12	-1.0
1,378,987	-		ABZR87_RS22375	0.12	+0.1
1,378,987	-		ABZR87_RS22375	0.12	-0.7
1,378,987	-		ABZR87_RS22375	0.12	-0.6
1,379,034	+		ABZR87_RS22375	0.22	+0.1
1,379,034	+		ABZR87_RS22375	0.22	+0.4
1,379,034	+		ABZR87_RS22375	0.22	-0.3
1,379,034	+		ABZR87_RS22375	0.22	-1.6
1,379,035	-		ABZR87_RS22375	0.22	+2.1
1,379,632	+				+0.3
1,379,632	+				-0.4
1,379,633	-				-0.4
1,379,633	-				+0.2
1,379,633	-				+0.4
1,379,690	+		ABZR87_RS22380	0.12	-0.3
1,379,690	+		ABZR87_RS22380	0.12	+0.0
1,379,690	+		ABZR87_RS22380	0.12	+0.5
1,379,691	-		ABZR87_RS22380	0.12	+1.7
1,379,691	-		ABZR87_RS22380	0.12	-0.1
1,379,902	+		ABZR87_RS22380	0.25	+0.4
1,379,902	+		ABZR87_RS22380	0.25	-0.7
1,379,902	+		ABZR87_RS22380	0.25	-0.1
1,379,902	+		ABZR87_RS22380	0.25	-0.4
1,379,903	-		ABZR87_RS22380	0.25	-0.2