Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS21730

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
1,259,064	+				+0.2
1,259,064	+				-0.3
1,259,065	-				-0.8
1,259,065	-				+0.5
1,259,153	-				+0.1
1,259,242	+		ABZR87_RS21725	0.20	-1.2
1,259,243	-		ABZR87_RS21725	0.20	-0.8
1,259,243	-		ABZR87_RS21725	0.20	-2.9
1,259,243	-		ABZR87_RS21725	0.20	-2.3
1,259,243	-		ABZR87_RS21725	0.20	-0.8
1,259,243	-		ABZR87_RS21725	0.20	+0.6
1,259,398	+		ABZR87_RS21725	0.43	-0.5
1,259,398	+		ABZR87_RS21725	0.43	-0.6
1,259,398	+		ABZR87_RS21725	0.43	-2.2
1,259,399	-		ABZR87_RS21725	0.43	-0.5
1,259,569	+		ABZR87_RS21725	0.68	+0.0
1,259,570	-		ABZR87_RS21725	0.68	-0.3
1,259,639	+		ABZR87_RS21725	0.78	-1.1
1,259,892	+				-0.3
1,259,892	+				-0.8
1,259,892	+				+1.3
1,259,893	-				-0.3
1,259,893	-				+0.3
1,259,893	-				+0.2
1,259,898	+				-0.9
1,259,898	+				+0.9
1,259,899	-				-0.3
1,259,987	-		ABZR87_RS21730	0.14	+0.8
1,260,024	+		ABZR87_RS21730	0.17	-1.1
1,260,024	+		ABZR87_RS21730	0.17	-1.5
1,260,027	-		ABZR87_RS21730	0.17	+0.3
1,260,172	+		ABZR87_RS21730	0.27	+1.4
1,260,306	+		ABZR87_RS21730	0.36	+0.6
1,260,306	+		ABZR87_RS21730	0.36	-0.5
1,260,307	-		ABZR87_RS21730	0.36	+0.1
1,260,648	+		ABZR87_RS21730	0.60	-0.4
1,260,649	-		ABZR87_RS21730	0.60	-0.5
1,260,681	+		ABZR87_RS21730	0.62	+1.6
1,260,681	+		ABZR87_RS21730	0.62	-0.1
1,260,682	-		ABZR87_RS21730	0.62	+0.1
1,260,801	+		ABZR87_RS21730	0.70	+0.2
1,261,266	-				-0.0
1,261,331	+		ABZR87_RS21735	0.26	+0.4
1,261,778	-				+0.3
1,261,816	+				+0.2
1,261,816	+				+0.8
1,261,816	+				-0.1
1,261,817	-				-0.1
1,261,903	+				+0.2
1,261,922	+				+0.8
1,261,923	-				+0.0
1,261,989	+		ABZR87_RS21740	0.14	-0.2
1,262,007	+		ABZR87_RS21740	0.16	+0.4
1,262,007	+		ABZR87_RS21740	0.16	-0.5
1,262,007	+		ABZR87_RS21740	0.16	+1.5
1,262,008	-		ABZR87_RS21740	0.16	+0.3
1,262,008	-		ABZR87_RS21740	0.16	+0.3
1,262,008	-		ABZR87_RS21740	0.16	-0.9
1,262,008	-		ABZR87_RS21740	0.16	-0.2