Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS21705

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
1,252,080	-		ABZR87_RS21695	0.11	-0.2
1,252,136	+		ABZR87_RS21695	0.20	-1.0
1,252,148	+		ABZR87_RS21695	0.22	-1.1
1,252,148	+		ABZR87_RS21695	0.22	-1.6
1,252,149	-		ABZR87_RS21695	0.22	+0.0
1,252,235	+		ABZR87_RS21695	0.36	-0.2
1,252,310	+		ABZR87_RS21695	0.48	+0.8
1,252,311	-		ABZR87_RS21695	0.48	-0.0
1,252,311	-		ABZR87_RS21695	0.48	+0.2
1,252,311	-		ABZR87_RS21695	0.48	+0.4
1,252,311	-		ABZR87_RS21695	0.48	+0.4
1,252,311	-		ABZR87_RS21695	0.48	-0.0
1,252,333	-		ABZR87_RS21695	0.51	-0.4
1,252,764	+		ABZR87_RS21700	0.48	-0.5
1,252,765	-		ABZR87_RS21700	0.49	+0.4
1,252,954	-				-0.3
1,252,966	-				-1.1
1,253,150	+				-1.9
1,253,150	+				+1.3
1,253,278	+		ABZR87_RS21705	0.12	-0.8
1,253,832	+		ABZR87_RS21705	0.30	-1.0
1,253,833	-		ABZR87_RS21705	0.30	-1.5
1,253,833	-		ABZR87_RS21705	0.30	+0.3
1,253,941	+		ABZR87_RS21705	0.33	+0.9
1,254,009	-		ABZR87_RS21705	0.35	-1.0
1,254,060	+		ABZR87_RS21705	0.37	-0.3
1,254,177	+		ABZR87_RS21705	0.41	+0.3
1,254,177	+		ABZR87_RS21705	0.41	-0.9
1,254,178	-		ABZR87_RS21705	0.41	-0.0
1,254,178	-		ABZR87_RS21705	0.41	-1.3
1,254,178	-		ABZR87_RS21705	0.41	+0.3
1,254,178	-		ABZR87_RS21705	0.41	+2.1
1,254,178	-		ABZR87_RS21705	0.41	+0.6
1,254,486	+		ABZR87_RS21705	0.50	+0.5
1,254,486	+		ABZR87_RS21705	0.50	+0.4
1,254,486	+		ABZR87_RS21705	0.50	-0.5
1,254,486	+		ABZR87_RS21705	0.50	+0.1
1,254,487	-		ABZR87_RS21705	0.50	+0.3
1,254,487	-		ABZR87_RS21705	0.50	-1.0
1,254,487	-		ABZR87_RS21705	0.50	-1.8
1,254,487	-		ABZR87_RS21705	0.50	+0.3
1,254,487	-		ABZR87_RS21705	0.50	+0.7
1,254,487	-		ABZR87_RS21705	0.50	+1.5
1,254,676	-		ABZR87_RS21705	0.56	-0.0
1,254,702	+		ABZR87_RS21705	0.57	+0.9
1,254,702	+		ABZR87_RS21705	0.57	-0.3
1,254,703	-		ABZR87_RS21705	0.57	-1.2
1,255,074	+		ABZR87_RS21705	0.69	-0.9
1,255,074	+		ABZR87_RS21705	0.69	-0.5
1,255,075	-		ABZR87_RS21705	0.69	-0.0
1,255,357	-		ABZR87_RS21705	0.78	+0.2
1,255,357	-		ABZR87_RS21705	0.78	-0.6
1,255,357	-		ABZR87_RS21705	0.78	+2.1
1,255,357	-		ABZR87_RS21705	0.78	-0.8
1,255,357	-		ABZR87_RS21705	0.78	-0.7
1,255,380	+		ABZR87_RS21705	0.78	+1.7
1,255,381	-		ABZR87_RS21705	0.78	-0.1
1,255,446	+		ABZR87_RS21705	0.81	+1.2
1,255,446	+		ABZR87_RS21705	0.81	-2.0
1,255,447	-		ABZR87_RS21705	0.81	+0.2
1,255,447	-		ABZR87_RS21705	0.81	-0.1
1,255,590	+		ABZR87_RS21705	0.85	-0.3
1,255,591	-		ABZR87_RS21705	0.85	-0.4
1,255,631	+		ABZR87_RS21705	0.86	+0.1
1,255,644	+		ABZR87_RS21705	0.87	-0.4
1,255,644	+		ABZR87_RS21705	0.87	-0.1
1,255,752	+				-3.5
1,255,863	+				+2.2
1,255,863	+				+1.7
1,255,863	+				-2.7
1,255,863	+				+0.2
1,255,863	+				+0.1
1,255,864	-				+1.2
1,255,864	-				+0.6
1,255,912	+				+1.4
1,255,969	+				-0.4
1,255,970	-				+0.0
1,255,970	-				-0.5
1,255,970	-				-0.1
1,255,970	-				-0.6
1,255,971	+				-0.8
1,255,971	+				-2.3
1,255,971	+				+1.1
1,255,972	-				-0.2
1,255,972	-				-0.2
1,255,972	-				+0.1
1,255,972	-				+1.6
1,255,977	+				+0.9
1,255,977	+				-0.9
1,255,978	-				-1.5
1,256,120	+				+0.8
1,256,120	+				-0.3
1,256,121	-				+0.6
1,256,121	-				+0.1
1,256,121	-				+1.6
1,256,121	-				+2.7
1,256,121	-				-1.3
1,256,138	+				-0.2
1,256,423	+		ABZR87_RS21710	0.29	-1.2
1,256,423	+		ABZR87_RS21710	0.29	-1.5
1,256,423	+		ABZR87_RS21710	0.29	+0.2
1,256,423	+		ABZR87_RS21710	0.29	+0.2
1,256,424	-		ABZR87_RS21710	0.29	+0.4
1,256,424	-		ABZR87_RS21710	0.29	+0.3
1,256,424	-		ABZR87_RS21710	0.29	+1.6
1,256,424	-		ABZR87_RS21710	0.29	+1.5
1,256,751	-		ABZR87_RS21710	0.57	+0.8