Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS21585

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
1,224,705	+				+0.3
1,224,706	-				+0.7
1,224,706	-				+0.4
1,224,850	+		ABZR87_RS21580	0.27	-1.6
1,224,850	+		ABZR87_RS21580	0.27	-1.4
1,224,850	+		ABZR87_RS21580	0.27	+0.4
1,224,850	+		ABZR87_RS21580	0.27	+0.4
1,224,851	-		ABZR87_RS21580	0.27	-1.5
1,224,851	-		ABZR87_RS21580	0.27	-0.3
1,224,851	-		ABZR87_RS21580	0.27	-1.0
1,224,887	+		ABZR87_RS21580	0.32	-0.1
1,224,887	+		ABZR87_RS21580	0.32	-0.7
1,224,902	+		ABZR87_RS21580	0.34	-0.8
1,224,903	-		ABZR87_RS21580	0.34	-0.3
1,225,226	+		ABZR87_RS21580	0.80	-1.0
1,225,284	-		ABZR87_RS21580	0.89	+0.5
1,225,284	-		ABZR87_RS21580	0.89	+0.8
1,225,284	-		ABZR87_RS21580	0.89	-0.0
1,225,434	-				-0.5
1,225,439	-				+0.3
1,225,593	+				-0.1
1,225,593	+				+0.0
1,225,594	-				-0.7
1,225,594	-				+0.0
1,225,607	+				-0.1
1,225,607	+				+0.2
1,225,608	-				+1.6
1,225,608	-				-0.6
1,225,608	-				-0.1
1,225,608	-				-0.4
1,225,608	-				-0.8
1,225,634	-				-0.2
1,225,879	-		ABZR87_RS21585	0.56	-1.2
1,225,879	-		ABZR87_RS21585	0.56	-0.6
1,226,060	+				+2.4
1,226,060	+				-1.0
1,226,060	+				+0.0
1,226,061	-				-2.7
1,226,061	-				-0.9
1,226,130	-		ABZR87_RS21590	0.13	-0.6
1,226,324	+		ABZR87_RS21590	0.43	+1.2
1,226,324	+		ABZR87_RS21590	0.43	-0.1
1,226,325	-		ABZR87_RS21590	0.43	-0.5
1,226,325	-		ABZR87_RS21590	0.43	+0.4
1,226,474	+		ABZR87_RS21590	0.67	-0.1
1,226,509	-		ABZR87_RS21590	0.72	-0.8
1,226,547	-		ABZR87_RS21590	0.78	+0.2
1,226,547	-		ABZR87_RS21590	0.78	-0.5
1,226,547	-		ABZR87_RS21590	0.78	-0.7
1,226,734	+				+1.5
1,226,758	-				-1.4
1,226,769	+				+1.2
1,226,769	+				+0.6
1,226,770	-				+0.8
1,226,770	-				-0.6
1,226,770	-				+0.9
1,226,770	-				+0.5
1,226,799	+				-0.6
1,227,002	+		ABZR87_RS21595	0.54	-0.2