Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS16155

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
3,417,594	+				+0.4
3,417,595	-				-1.5
3,418,048	+		ABZR87_RS16150	0.49	+0.3
3,418,103	+		ABZR87_RS16150	0.55	+0.2
3,418,103	+		ABZR87_RS16150	0.55	+0.9
3,418,103	+		ABZR87_RS16150	0.55	-0.9
3,418,104	-		ABZR87_RS16150	0.55	-0.4
3,418,107	+		ABZR87_RS16150	0.56	+0.9
3,418,107	+		ABZR87_RS16150	0.56	+0.1
3,418,107	+		ABZR87_RS16150	0.56	+0.9
3,418,107	+		ABZR87_RS16150	0.56	+0.3
3,418,107	+		ABZR87_RS16150	0.56	-0.7
3,418,107	+		ABZR87_RS16150	0.56	-0.4
3,418,107	+		ABZR87_RS16150	0.56	-0.1
3,418,107	+		ABZR87_RS16150	0.56	-1.1
3,418,108	-		ABZR87_RS16150	0.56	-1.1
3,418,108	-		ABZR87_RS16150	0.56	-0.0
3,418,108	-		ABZR87_RS16150	0.56	-0.1
3,418,108	-		ABZR87_RS16150	0.56	+0.1
3,418,108	-		ABZR87_RS16150	0.56	-0.8
3,418,108	-		ABZR87_RS16150	0.56	+0.0
3,418,122	+		ABZR87_RS16150	0.57	-0.3
3,418,122	+		ABZR87_RS16150	0.57	-0.7
3,418,122	+		ABZR87_RS16150	0.57	+0.1
3,418,122	+		ABZR87_RS16150	0.57	+0.2
3,418,344	+		ABZR87_RS16150	0.82	+1.4
3,418,533	+				+0.5
3,418,533	+				-0.2
3,418,534	-				-0.1
3,418,534	-				+0.5
3,418,647	+		ABZR87_RS16155	0.19	-0.5
3,418,648	-		ABZR87_RS16155	0.19	-0.6
3,418,672	-		ABZR87_RS16155	0.23	-0.4
3,418,755	+		ABZR87_RS16155	0.37	-0.0
3,418,755	+		ABZR87_RS16155	0.37	-0.0
3,418,755	+		ABZR87_RS16155	0.37	-1.1
3,418,756	-		ABZR87_RS16155	0.37	-1.1
3,418,908	+		ABZR87_RS16155	0.62	-0.3
3,418,909	-		ABZR87_RS16155	0.62	-0.3
3,419,131	+				+1.9
3,419,131	+				-0.5
3,419,131	+				-0.5
3,419,131	+				+0.6
3,419,131	+				-0.9
3,419,132	-				-0.5
3,419,132	-				+0.5
3,419,132	-				+0.2
3,419,132	-				+0.1
3,419,206	+				-0.2
3,419,206	+				+0.3
3,419,206	+				-0.1
3,419,227	+				+0.0
3,419,228	-				-0.8
3,419,228	-				-0.5
3,419,228	-				+0.1
3,419,228	-				+0.5
3,419,228	-				-0.5
3,419,302	+				-1.0
3,419,302	+				-1.0
3,419,303	-				+0.1
3,419,303	-				-1.0
3,419,306	+				+0.6
3,419,307	-				+0.7
3,419,353	+				-0.3
3,419,353	+				-0.1
3,419,353	+				-0.2
3,419,353	+				+0.2
3,419,354	-				-0.2
3,419,501	+		ABZR87_RS16160	0.24	-0.0
3,419,501	+		ABZR87_RS16160	0.24	-1.6
3,419,501	+		ABZR87_RS16160	0.24	-0.1
3,419,501	+		ABZR87_RS16160	0.24	+0.7
3,419,501	+		ABZR87_RS16160	0.24	+2.0
3,419,501	+		ABZR87_RS16160	0.24	-0.5
3,419,501	+		ABZR87_RS16160	0.24	+0.3
3,419,501	+		ABZR87_RS16160	0.24	+0.5
3,419,501	+		ABZR87_RS16160	0.24	+0.7
3,419,502	-		ABZR87_RS16160	0.24	-0.1
3,419,502	-		ABZR87_RS16160	0.24	-2.0
3,419,502	-		ABZR87_RS16160	0.24	+0.3
3,419,502	-		ABZR87_RS16160	0.24	-0.3
3,419,503	+		ABZR87_RS16160	0.25	+0.4
3,419,503	+		ABZR87_RS16160	0.25	-0.0
3,419,504	-		ABZR87_RS16160	0.25	-0.7
3,419,504	-		ABZR87_RS16160	0.25	-0.4
3,419,505	+		ABZR87_RS16160	0.25	+0.6
3,419,505	+		ABZR87_RS16160	0.25	-1.2
3,419,505	+		ABZR87_RS16160	0.25	+0.6
3,419,505	+		ABZR87_RS16160	0.25	+0.5
3,419,505	+		ABZR87_RS16160	0.25	-0.9
3,419,505	+		ABZR87_RS16160	0.25	-1.0
3,419,505	+		ABZR87_RS16160	0.25	+0.5
3,419,505	+		ABZR87_RS16160	0.25	-0.3
3,419,505	+		ABZR87_RS16160	0.25	+0.2
3,419,506	-		ABZR87_RS16160	0.25	+0.4
3,419,545	-		ABZR87_RS16160	0.31	-0.2
3,419,545	-		ABZR87_RS16160	0.31	+1.1
3,419,545	-		ABZR87_RS16160	0.31	-1.3
3,419,620	+		ABZR87_RS16160	0.43	-0.4
3,420,039	+				+0.5
3,420,039	+				+1.4