Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS16110

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
3,403,878	+				+0.7
3,403,879	-				-1.9
3,403,912	+				-0.1
3,403,912	+				-0.7
3,403,913	-				+0.4
3,403,913	-				-0.1
3,403,950	-				+0.2
3,403,950	-				-1.2
3,403,981	-				+2.0
3,403,981	-				+0.1
3,403,984	+				-0.5
3,404,018	+				-1.5
3,404,018	+				+1.0
3,404,018	+				-0.7
3,404,018	+				+0.2
3,404,019	-				+1.2
3,404,019	-				+0.4
3,404,019	-				-0.5
3,404,019	-				+0.2
3,404,019	-				-0.4
3,404,019	-				-0.1
3,404,019	-				+1.3
3,404,019	-				+0.3
3,404,019	-				-0.2
3,404,019	-				+0.8
3,404,019	-				+1.1
3,404,019	-				+0.2
3,404,164	+				+0.0
3,404,165	-				+0.4
3,404,174	+				-0.1
3,404,174	+				+0.2
3,404,174	+				-0.2
3,404,175	-				+0.5
3,404,175	-				-0.1
3,404,181	+				-0.1
3,404,181	+				+1.4
3,404,182	-				-0.0
3,404,182	-				-0.8
3,404,182	-				-1.6
3,404,763	-				+1.1
3,404,784	-				-0.3
3,404,785	+				+0.5
3,404,785	+				+0.3
3,404,785	+				-0.6
3,404,785	+				+1.1
3,404,785	+				+0.5
3,404,785	+				+1.2
3,404,785	+				+0.3
3,404,786	-				+0.3
3,404,786	-				+0.5
3,404,786	-				+0.0
3,404,786	-				+0.4
3,404,786	-				-0.4
3,404,993	-				-1.0
3,405,085	-		ABZR87_RS16110	0.15	+0.6
3,405,085	-		ABZR87_RS16110	0.15	+1.0
3,405,191	+		ABZR87_RS16110	0.22	+0.1
3,405,203	+		ABZR87_RS16110	0.23	-0.3
3,405,203	+		ABZR87_RS16110	0.23	+0.2
3,405,203	+		ABZR87_RS16110	0.23	+0.4
3,405,256	+		ABZR87_RS16110	0.27	-0.1
3,405,256	+		ABZR87_RS16110	0.27	-0.2
3,405,257	-		ABZR87_RS16110	0.27	+0.1
3,405,317	+		ABZR87_RS16110	0.31	+0.7
3,405,479	+		ABZR87_RS16110	0.42	+0.7
3,405,749	+		ABZR87_RS16110	0.61	+0.8
3,405,749	+		ABZR87_RS16110	0.61	+0.5
3,405,749	+		ABZR87_RS16110	0.61	-1.8
3,405,749	+		ABZR87_RS16110	0.61	+0.5
3,405,750	-		ABZR87_RS16110	0.61	+0.0
3,405,750	-		ABZR87_RS16110	0.61	-0.3
3,405,950	+		ABZR87_RS16110	0.75	+0.1
3,405,950	+		ABZR87_RS16110	0.75	-1.4
3,405,950	+		ABZR87_RS16110	0.75	+0.3
3,405,950	+		ABZR87_RS16110	0.75	+0.4
3,405,951	-		ABZR87_RS16110	0.75	+0.1
3,405,951	-		ABZR87_RS16110	0.75	-0.2
3,405,951	-		ABZR87_RS16110	0.75	+1.5
3,405,951	-		ABZR87_RS16110	0.75	-0.3
3,406,085	+		ABZR87_RS16110	0.85	+0.5
3,406,086	-		ABZR87_RS16110	0.85	+0.1
3,406,262	+				-0.9
3,406,263	-				-0.2
3,406,263	-				+2.0
3,406,304	+				+0.3
3,406,586	-		ABZR87_RS16115	0.31	-0.6
3,406,595	+		ABZR87_RS16115	0.33	-0.6
3,406,599	+		ABZR87_RS16115	0.33	-1.0
3,406,599	+		ABZR87_RS16115	0.33	+0.1
3,406,599	+		ABZR87_RS16115	0.33	-0.2
3,406,599	+		ABZR87_RS16115	0.33	-0.3
3,406,600	-		ABZR87_RS16115	0.33	+0.0
3,406,600	-		ABZR87_RS16115	0.33	+0.5
3,406,702	+		ABZR87_RS16115	0.47	+0.6
3,406,702	+		ABZR87_RS16115	0.47	-0.2
3,406,702	+		ABZR87_RS16115	0.47	-0.3
3,406,703	-		ABZR87_RS16115	0.47	-1.4
3,406,810	+		ABZR87_RS16115	0.61	-0.0
3,406,811	-		ABZR87_RS16115	0.61	-0.7
3,406,943	+		ABZR87_RS16115	0.78	+0.3
3,407,035	+				-1.1
3,407,036	-				-0.8
3,407,036	-				+0.2
3,407,036	-				+0.4
3,407,036	-				+0.8
3,407,102	+				+0.6
3,407,102	+				-0.9
3,407,102	+				-0.5
3,407,103	-				+1.2
3,407,103	-				+0.4
3,407,103	-				+0.6
3,407,105	+				-0.3
3,407,105	-				-0.0
3,407,105	-				+0.5
3,407,179	+				+0.1
3,407,179	+				+0.4
3,407,180	-				+0.1
3,407,183	+				-0.3
3,407,183	+				-1.0
3,407,183	+				-0.9
3,407,213	+				-0.2
3,407,214	-				+0.2
3,407,214	-				-0.5
3,407,214	-				+0.2
3,407,214	-				+0.1
3,407,273	+				-1.9
3,407,273	+				+0.4
3,407,273	+				-0.3
3,407,273	+				-0.2