Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS16025

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
3,386,333	+		ABZR87_RS16015	0.19	+0.3
3,386,412	+		ABZR87_RS16015	0.28	+1.2
3,386,412	+		ABZR87_RS16015	0.28	+0.6
3,386,412	+		ABZR87_RS16015	0.28	-0.8
3,386,413	-		ABZR87_RS16015	0.28	-0.3
3,386,413	-		ABZR87_RS16015	0.28	-0.7
3,386,520	+		ABZR87_RS16015	0.39	-0.5
3,386,520	+		ABZR87_RS16015	0.39	-0.1
3,386,520	+		ABZR87_RS16015	0.39	+0.0
3,386,521	-		ABZR87_RS16015	0.39	-1.1
3,386,704	-		ABZR87_RS16015	0.58	+0.6
3,386,740	-		ABZR87_RS16015	0.62	-1.3
3,386,822	+		ABZR87_RS16015	0.71	-0.3
3,386,901	-		ABZR87_RS16015	0.79	-0.7
3,386,901	-		ABZR87_RS16015	0.79	+0.9
3,386,901	-		ABZR87_RS16015	0.79	+0.1
3,386,901	-		ABZR87_RS16015	0.79	-0.5
3,386,943	+		ABZR87_RS16015	0.84	-0.8
3,386,944	-		ABZR87_RS16015	0.84	-0.6
3,387,096	+				-0.9
3,387,097	-				+0.2
3,387,126	-				-0.4
3,387,145	+				-0.2
3,387,145	+				+0.7
3,388,695	+				-0.6
3,388,696	-				-0.4
3,388,716	+				-0.2
3,388,716	+				-2.0
3,388,716	+				+2.4
3,388,716	+				-0.0
3,388,716	+				-0.1
3,388,717	-				-0.1
3,388,717	-				-0.2
3,388,717	-				+0.5
3,388,724	-				+0.9
3,388,724	-				-0.3
3,388,828	-				+0.7
3,388,828	-				-2.1
3,388,860	+		ABZR87_RS16030	0.11	-0.9
3,388,860	+		ABZR87_RS16030	0.11	+0.4
3,388,860	+		ABZR87_RS16030	0.11	-0.4
3,388,878	+		ABZR87_RS16030	0.12	+0.1
3,388,878	+		ABZR87_RS16030	0.12	+0.8
3,388,878	+		ABZR87_RS16030	0.12	+2.4
3,388,878	+		ABZR87_RS16030	0.12	+0.1
3,388,879	-		ABZR87_RS16030	0.13	-0.6
3,388,903	-		ABZR87_RS16030	0.14	-1.0
3,388,908	+		ABZR87_RS16030	0.15	+0.4
3,389,016	+		ABZR87_RS16030	0.23	+0.8
3,389,016	+		ABZR87_RS16030	0.23	-0.9
3,389,025	+		ABZR87_RS16030	0.24	+0.7
3,389,025	+		ABZR87_RS16030	0.24	-0.4
3,389,025	+		ABZR87_RS16030	0.24	-0.0
3,389,026	-		ABZR87_RS16030	0.24	-0.4
3,389,026	-		ABZR87_RS16030	0.24	-1.1
3,389,026	-		ABZR87_RS16030	0.24	+0.7
3,389,058	+		ABZR87_RS16030	0.26	-0.1
3,389,058	+		ABZR87_RS16030	0.26	-0.7
3,389,059	-		ABZR87_RS16030	0.26	+0.9
3,389,059	-		ABZR87_RS16030	0.26	-0.3
3,389,059	-		ABZR87_RS16030	0.26	+0.5
3,389,059	-		ABZR87_RS16030	0.26	+1.4
3,389,112	+		ABZR87_RS16030	0.30	-1.3
3,389,113	-		ABZR87_RS16030	0.30	-0.3
3,389,205	+		ABZR87_RS16030	0.37	-1.0
3,389,247	+		ABZR87_RS16030	0.41	+0.4
3,389,248	-		ABZR87_RS16030	0.41	+1.2
3,389,307	+		ABZR87_RS16030	0.45	-0.1
3,389,307	+		ABZR87_RS16030	0.45	+1.2
3,389,307	+		ABZR87_RS16030	0.45	-0.0
3,389,308	-		ABZR87_RS16030	0.45	+0.0
3,389,308	-		ABZR87_RS16030	0.45	+0.1
3,389,584	-		ABZR87_RS16030	0.66	+1.7