Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS14675

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
3,099,041	+		ABZR87_RS14670	0.18	+0.5
3,099,041	+		ABZR87_RS14670	0.18	+0.4
3,099,041	+		ABZR87_RS14670	0.18	-0.0
3,099,041	+		ABZR87_RS14670	0.18	-1.3
3,099,041	+		ABZR87_RS14670	0.18	+0.0
3,099,042	-		ABZR87_RS14670	0.18	-0.2
3,099,042	-		ABZR87_RS14670	0.18	+0.1
3,099,161	+		ABZR87_RS14670	0.29	+0.4
3,099,161	+		ABZR87_RS14670	0.29	+0.0
3,099,161	+		ABZR87_RS14670	0.29	-2.0
3,099,161	+		ABZR87_RS14670	0.29	-0.0
3,099,161	+		ABZR87_RS14670	0.29	-0.1
3,099,161	+		ABZR87_RS14670	0.29	+0.2
3,099,162	-		ABZR87_RS14670	0.29	+0.2
3,099,162	-		ABZR87_RS14670	0.29	-0.1
3,099,190	-		ABZR87_RS14670	0.32	-0.1
3,099,203	+		ABZR87_RS14670	0.33	-0.0
3,099,203	+		ABZR87_RS14670	0.33	+0.2
3,099,203	+		ABZR87_RS14670	0.33	-0.8
3,099,203	+		ABZR87_RS14670	0.33	+0.3
3,099,203	+		ABZR87_RS14670	0.33	+0.3
3,099,204	-		ABZR87_RS14670	0.33	+0.7
3,099,204	-		ABZR87_RS14670	0.33	-0.3
3,099,204	-		ABZR87_RS14670	0.33	-0.2
3,099,204	-		ABZR87_RS14670	0.33	-3.0
3,099,204	-		ABZR87_RS14670	0.33	+0.8
3,099,204	-		ABZR87_RS14670	0.33	-0.3
3,099,220	-		ABZR87_RS14670	0.35	+0.0
3,099,220	-		ABZR87_RS14670	0.35	+0.5
3,099,284	+		ABZR87_RS14670	0.40	+0.8
3,099,285	-		ABZR87_RS14670	0.41	+1.0
3,099,285	-		ABZR87_RS14670	0.41	-0.1
3,099,285	-		ABZR87_RS14670	0.41	+0.6
3,099,285	-		ABZR87_RS14670	0.41	+1.0
3,099,329	+		ABZR87_RS14670	0.45	+0.0
3,099,354	-		ABZR87_RS14670	0.47	+2.0
3,099,371	+		ABZR87_RS14670	0.48	-0.4
3,099,372	-		ABZR87_RS14670	0.49	+0.3
3,099,372	-		ABZR87_RS14670	0.49	+0.0
3,099,372	-		ABZR87_RS14670	0.49	-0.7
3,099,408	-		ABZR87_RS14670	0.52	+0.1
3,099,408	-		ABZR87_RS14670	0.52	-0.3
3,099,408	-		ABZR87_RS14670	0.52	-0.6
3,099,408	-		ABZR87_RS14670	0.52	+0.6
3,099,621	-		ABZR87_RS14670	0.71	-0.4
3,099,713	+		ABZR87_RS14670	0.80	-0.1
3,099,713	+		ABZR87_RS14670	0.80	-0.5
3,099,714	-		ABZR87_RS14670	0.80	-0.4
3,099,714	-		ABZR87_RS14670	0.80	-0.2
3,099,770	+		ABZR87_RS14670	0.85	-1.4
3,099,771	-		ABZR87_RS14670	0.85	-1.1
3,099,771	-		ABZR87_RS14670	0.85	-1.2
3,099,779	+		ABZR87_RS14670	0.86	+0.1
3,099,780	-		ABZR87_RS14670	0.86	+0.2
3,099,780	-		ABZR87_RS14670	0.86	+0.9
3,099,909	-				-1.3
3,099,963	+				-0.8
3,099,964	-				-1.0
3,100,148	-		ABZR87_RS14675	0.49	-1.3
3,100,360	+				-0.6
3,100,360	+				+0.8
3,100,361	-				+0.4
3,100,361	-				-0.8
3,100,410	+				+0.9
3,100,410	+				-0.3
3,100,706	+		ABZR87_RS14680	0.49	+0.7
3,100,899	+		ABZR87_RS14680	0.76	-0.3
3,101,148	-				+0.7
3,101,148	-				-0.3