Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS14375

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
3,038,558	+				+0.5
3,038,681	+				-0.4
3,038,797	-		ABZR87_RS14370	0.14	-3.1
3,038,797	-		ABZR87_RS14370	0.14	-0.9
3,038,797	-		ABZR87_RS14370	0.14	+0.3
3,038,826	+		ABZR87_RS14370	0.19	+0.3
3,038,826	+		ABZR87_RS14370	0.19	+0.1
3,038,826	+		ABZR87_RS14370	0.19	+0.7
3,038,826	+		ABZR87_RS14370	0.19	+0.5
3,038,826	+		ABZR87_RS14370	0.19	+0.5
3,038,827	-		ABZR87_RS14370	0.20	-0.6
3,038,827	-		ABZR87_RS14370	0.20	-3.2
3,038,832	+		ABZR87_RS14370	0.21	-0.2
3,038,832	+		ABZR87_RS14370	0.21	-0.2
3,038,832	+		ABZR87_RS14370	0.21	-0.4
3,038,832	+		ABZR87_RS14370	0.21	-0.5
3,038,833	-		ABZR87_RS14370	0.21	-0.3
3,039,329	+				-0.4
3,039,329	+				+0.8
3,039,329	+				-0.4
3,039,330	-				+0.8
3,039,330	-				+0.1
3,039,330	-				-0.9
3,039,330	-				+1.4
3,039,431	+				+0.6
3,039,431	+				+0.2
3,039,432	-				+0.7
3,039,433	+				+1.4
3,039,433	+				+0.2
3,039,433	+				+0.3
3,039,433	+				+0.6
3,039,433	+				-1.5
3,039,433	+				+0.6
3,039,434	-				-0.2
3,039,434	-				-1.8
3,039,434	-				-0.4
3,039,434	-				+0.2
3,039,434	-				+0.9
3,039,505	-				+0.4
3,039,505	-				+0.3
3,039,505	-				-1.5
3,039,513	+				+0.5
3,039,514	-				+0.6
3,039,532	-				-1.9
3,039,532	-				-1.4
3,039,555	+				+0.5
3,039,756	+		ABZR87_RS14375	0.20	-0.3
3,040,152	+		ABZR87_RS14375	0.46	-0.5
3,040,153	-		ABZR87_RS14375	0.46	-1.6
3,040,153	-		ABZR87_RS14375	0.46	-1.7
3,040,570	-		ABZR87_RS14375	0.73	-1.4
3,040,570	-		ABZR87_RS14375	0.73	-0.8
3,040,572	+		ABZR87_RS14375	0.74	-0.7
3,040,572	+		ABZR87_RS14375	0.74	-0.0
3,040,573	-		ABZR87_RS14375	0.74	-1.3
3,040,779	+		ABZR87_RS14375	0.87	+1.2
3,040,780	-		ABZR87_RS14375	0.87	+0.5
3,040,848	+				-0.9
3,040,848	+				-0.5
3,040,992	+				+0.8
3,040,992	+				-1.0
3,040,993	-				+0.4
3,040,993	-				-2.9
3,041,098	+		ABZR87_RS14380	0.12	+1.1
3,041,098	+		ABZR87_RS14380	0.12	-1.3
3,041,146	+		ABZR87_RS14380	0.18	-0.2
3,041,146	+		ABZR87_RS14380	0.18	+0.1
3,041,147	-		ABZR87_RS14380	0.18	+0.2
3,041,147	-		ABZR87_RS14380	0.18	-0.0
3,041,147	-		ABZR87_RS14380	0.18	+0.3
3,041,147	-		ABZR87_RS14380	0.18	-0.8
3,041,500	+		ABZR87_RS14380	0.60	+1.0
3,041,501	-		ABZR87_RS14380	0.60	+0.8
3,041,557	+		ABZR87_RS14380	0.66	-0.9
3,041,558	-		ABZR87_RS14380	0.67	+0.5
3,041,558	-		ABZR87_RS14380	0.67	-1.1
3,041,941	+				+0.2
3,041,941	+				-1.4