Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS12800

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
2,719,151	-				-1.3
2,719,197	+				-1.9
2,719,198	-				-0.8
2,719,204	-				-0.6
2,719,221	+				-0.3
2,719,222	-				-0.2
2,719,222	-				+0.2
2,719,222	-				+1.7
2,719,222	-				+0.4
2,719,222	-				-0.1
2,719,232	-				+0.0
2,719,260	+				+0.2
2,719,260	+				-0.6
2,719,333	+				+0.6
2,719,354	+				-0.2
2,719,354	+				-1.5
2,719,354	+				+0.7
2,719,354	+				-1.1
2,719,354	+				-0.6
2,719,354	+				+0.4
2,719,354	+				+0.0
2,719,354	+				-0.1
2,719,354	+				+0.4
2,719,355	-				+0.6
2,719,355	-				-0.6
2,719,355	-				+0.0
2,719,355	-				-0.4
2,719,355	-				-1.8
2,719,371	+				-0.1
2,719,371	+				+0.7
2,719,371	+				+1.2
2,719,372	-				-0.1
2,719,476	-		ABZR87_RS12795	0.14	+0.5
2,719,531	+		ABZR87_RS12795	0.23	+0.7
2,719,532	-		ABZR87_RS12795	0.23	-1.4
2,719,532	-		ABZR87_RS12795	0.23	+2.6
2,719,732	+		ABZR87_RS12795	0.54	+0.0
2,719,732	+		ABZR87_RS12795	0.54	-2.1
2,719,732	+		ABZR87_RS12795	0.54	+0.2
2,719,733	-		ABZR87_RS12795	0.54	-1.3
2,719,777	+		ABZR87_RS12795	0.61	-0.4
2,719,778	-		ABZR87_RS12795	0.61	-1.0
2,719,778	-		ABZR87_RS12795	0.61	+0.4
2,719,903	+		ABZR87_RS12795	0.80	+0.3
2,719,903	+		ABZR87_RS12795	0.80	-0.6
2,719,904	-		ABZR87_RS12795	0.80	-0.7
2,719,904	-		ABZR87_RS12795	0.80	-0.6
2,719,907	+		ABZR87_RS12795	0.81	-0.6
2,719,907	+		ABZR87_RS12795	0.81	-0.5
2,719,907	+		ABZR87_RS12795	0.81	+0.0
2,719,907	+		ABZR87_RS12795	0.81	+0.4
2,719,908	-		ABZR87_RS12795	0.81	-2.5
2,719,908	-		ABZR87_RS12795	0.81	-0.6
2,719,908	-		ABZR87_RS12795	0.81	+0.4
2,719,908	-		ABZR87_RS12795	0.81	-1.4
2,720,047	+				-1.1
2,720,048	-				-0.5
2,720,048	-				+0.1
2,720,048	-				-0.4
2,720,048	-				-0.5
2,720,048	-				-1.4
2,720,048	-				+0.8
2,720,048	-				+0.4
2,720,175	+				-2.1
2,720,175	+				-1.2
2,720,212	-		ABZR87_RS12800	0.10	-1.6
2,720,212	-		ABZR87_RS12800	0.10	-0.2
2,720,214	+		ABZR87_RS12800	0.11	+0.4
2,720,214	+		ABZR87_RS12800	0.11	-1.2
2,720,215	-		ABZR87_RS12800	0.11	+0.8
2,720,244	+		ABZR87_RS12800	0.13	-2.3
2,720,245	-		ABZR87_RS12800	0.13	+0.6
2,720,724	+		ABZR87_RS12800	0.49	-0.1
2,720,724	+		ABZR87_RS12800	0.49	-0.6
2,720,724	+		ABZR87_RS12800	0.49	-1.5
2,720,724	+		ABZR87_RS12800	0.49	-2.0
2,720,725	-		ABZR87_RS12800	0.49	-2.1
2,720,807	-		ABZR87_RS12800	0.55	-0.6
2,720,964	+		ABZR87_RS12800	0.66	-1.1
2,720,964	+		ABZR87_RS12800	0.66	-0.3
2,720,965	-		ABZR87_RS12800	0.66	-0.4
2,720,965	-		ABZR87_RS12800	0.66	+1.0
2,721,082	-		ABZR87_RS12800	0.75	-0.7
2,721,247	-		ABZR87_RS12800	0.87	+0.7
2,721,422	-				+0.0
2,721,422	-				-2.0
2,721,422	-				-3.8
2,721,588	-				-0.1
2,721,588	-				-0.9
2,721,590	+				-0.0
2,721,661	+				-0.3
2,721,661	+				-0.8
2,721,662	-				-1.5
2,721,662	-				+0.0
2,721,662	-				-0.0
2,721,662	-				-0.2
2,721,862	+		ABZR87_RS12805	0.10	-0.6
2,721,863	-		ABZR87_RS12805	0.10	-0.9
2,721,877	+		ABZR87_RS12805	0.11	+0.5
2,721,877	+		ABZR87_RS12805	0.11	+0.9
2,721,878	-		ABZR87_RS12805	0.11	-0.8
2,721,878	-		ABZR87_RS12805	0.11	-0.3
2,721,878	-		ABZR87_RS12805	0.11	-1.4
2,721,878	-		ABZR87_RS12805	0.11	+1.4
2,721,878	-		ABZR87_RS12805	0.11	+0.4
2,721,878	-		ABZR87_RS12805	0.11	+0.1
2,722,009	+		ABZR87_RS12805	0.17	+0.3
2,722,010	-		ABZR87_RS12805	0.17	+0.1
2,722,010	-		ABZR87_RS12805	0.17	-2.8
2,722,010	-		ABZR87_RS12805	0.17	+0.4
2,722,149	+		ABZR87_RS12805	0.24	-0.4
2,722,149	+		ABZR87_RS12805	0.24	+0.2
2,722,189	+		ABZR87_RS12805	0.26	-0.7
2,722,190	-		ABZR87_RS12805	0.26	-0.1
2,722,325	+		ABZR87_RS12805	0.33	-0.5
2,722,325	+		ABZR87_RS12805	0.33	+0.5
2,722,326	-		ABZR87_RS12805	0.33	+0.4
2,722,326	-		ABZR87_RS12805	0.33	-0.4
2,722,326	-		ABZR87_RS12805	0.33	+0.2