Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS11750

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
2,489,720	-		ABZR87_RS11740	0.54	-0.4
2,489,822	+		ABZR87_RS11740	0.66	-1.5
2,489,822	+		ABZR87_RS11740	0.66	-0.5
2,489,823	-		ABZR87_RS11740	0.66	-0.4
2,489,861	+		ABZR87_RS11740	0.70	-0.6
2,489,861	+		ABZR87_RS11740	0.70	-1.1
2,489,862	-		ABZR87_RS11740	0.70	-1.6
2,489,862	-		ABZR87_RS11740	0.70	-0.6
2,489,996	+		ABZR87_RS11740	0.85	+0.1
2,489,996	+		ABZR87_RS11740	0.85	+1.0
2,489,996	+		ABZR87_RS11740	0.85	+0.4
2,489,997	-		ABZR87_RS11740	0.85	-0.3
2,490,072	-				-0.5
2,490,072	-				+0.7
2,490,181	+				-1.0
2,490,181	+				-0.2
2,490,181	+				-1.0
2,490,246	+		ABZR87_RS11745	0.18	-0.1
2,490,269	+		ABZR87_RS11745	0.23	-0.1
2,490,353	-		ABZR87_RS11745	0.39	+0.5
2,490,448	+		ABZR87_RS11745	0.57	-0.3
2,490,449	-		ABZR87_RS11745	0.58	-0.1
2,490,487	+		ABZR87_RS11745	0.65	+0.5
2,490,487	+		ABZR87_RS11745	0.65	-0.5
2,490,487	+		ABZR87_RS11745	0.65	-0.6
2,490,488	-		ABZR87_RS11745	0.65	-1.0
2,490,488	-		ABZR87_RS11745	0.65	-0.2
2,491,870	-				+0.2
2,491,885	-				+0.0
2,492,133	+		ABZR87_RS11755	0.77	+0.2
2,492,134	-		ABZR87_RS11755	0.77	-0.8
2,492,436	+		ABZR87_RS11760	0.50	+1.0
2,492,676	+				+0.5
2,492,676	+				-1.1
2,492,703	-				+0.2