Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS11735

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
2,487,652	+		ABZR87_RS11730	0.31	-1.1
2,487,707	-		ABZR87_RS11730	0.37	-0.2
2,487,985	+		ABZR87_RS11730	0.71	-1.1
2,487,986	-		ABZR87_RS11730	0.71	-0.3
2,488,161	-				-0.4
2,488,161	-				+0.4
2,488,173	-				-1.0
2,488,173	-				-0.9
2,488,450	+				-0.1
2,488,507	+				-1.0
2,488,584	+		ABZR87_RS11735	0.11	+0.2
2,489,231	+				+0.7
2,489,257	+				+0.1
2,489,495	-		ABZR87_RS11740	0.29	+0.7
2,489,499	-		ABZR87_RS11740	0.30	-0.0
2,489,525	+		ABZR87_RS11740	0.33	-1.8
2,489,525	+		ABZR87_RS11740	0.33	-0.6
2,489,525	+		ABZR87_RS11740	0.33	+0.6
2,489,525	+		ABZR87_RS11740	0.33	-1.0
2,489,526	-		ABZR87_RS11740	0.33	-0.6
2,489,526	-		ABZR87_RS11740	0.33	+0.1
2,489,526	-		ABZR87_RS11740	0.33	-2.4
2,489,552	+		ABZR87_RS11740	0.36	+0.7
2,489,552	+		ABZR87_RS11740	0.36	-0.5
2,489,553	-		ABZR87_RS11740	0.36	-1.5
2,489,720	-		ABZR87_RS11740	0.54	-0.4
2,489,822	+		ABZR87_RS11740	0.66	-1.5
2,489,822	+		ABZR87_RS11740	0.66	-0.5
2,489,823	-		ABZR87_RS11740	0.66	-0.4
2,489,861	+		ABZR87_RS11740	0.70	-0.6
2,489,861	+		ABZR87_RS11740	0.70	-1.1
2,489,862	-		ABZR87_RS11740	0.70	-1.6
2,489,862	-		ABZR87_RS11740	0.70	-0.6