Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS11730
Experiment: Acanthamoeba sp., muxed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Acanthamoeba sp., muxed culture-2 |
---|---|---|---|---|---|
remove | |||||
2,486,794 | + | ABZR87_RS11725 | 0.42 | +0.3 | |
2,486,795 | - | ABZR87_RS11725 | 0.42 | +0.2 | |
2,486,916 | + | ABZR87_RS11725 | 0.53 | +0.7 | |
2,486,917 | - | ABZR87_RS11725 | 0.54 | -1.0 | |
2,487,107 | + | ABZR87_RS11725 | 0.72 | -0.4 | |
2,487,206 | - | ABZR87_RS11725 | 0.82 | -0.5 | |
2,487,208 | - | ABZR87_RS11725 | 0.82 | +0.2 | |
2,487,209 | - | ABZR87_RS11725 | 0.82 | +0.6 | |
2,487,652 | + | ABZR87_RS11730 | 0.31 | -1.1 | |
2,487,707 | - | ABZR87_RS11730 | 0.37 | -0.2 | |
2,487,985 | + | ABZR87_RS11730 | 0.71 | -1.1 | |
2,487,986 | - | ABZR87_RS11730 | 0.71 | -0.3 | |
2,488,161 | - | -0.4 | |||
2,488,161 | - | +0.4 | |||
2,488,173 | - | -1.0 | |||
2,488,173 | - | -0.9 | |||
2,488,450 | + | -0.1 | |||
2,488,507 | + | -1.0 | |||
2,488,584 | + | ABZR87_RS11735 | 0.11 | +0.2 |
Or see this region's nucleotide sequence