Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS11610

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
2,460,195	+		ABZR87_RS11605	0.48	-0.5
2,460,196	-		ABZR87_RS11605	0.48	+0.3
2,460,196	-		ABZR87_RS11605	0.48	+0.4
2,460,252	+		ABZR87_RS11605	0.52	-0.7
2,460,252	+		ABZR87_RS11605	0.52	+0.3
2,460,253	-		ABZR87_RS11605	0.52	-1.1
2,460,336	+		ABZR87_RS11605	0.58	+0.4
2,460,336	+		ABZR87_RS11605	0.58	+0.4
2,460,336	+		ABZR87_RS11605	0.58	+0.1
2,460,336	+		ABZR87_RS11605	0.58	-1.5
2,460,337	-		ABZR87_RS11605	0.58	+0.2
2,460,543	+		ABZR87_RS11605	0.72	-0.0
2,460,543	+		ABZR87_RS11605	0.72	+0.1
2,460,543	+		ABZR87_RS11605	0.72	-0.6
2,460,543	+		ABZR87_RS11605	0.72	-0.3
2,460,544	-		ABZR87_RS11605	0.72	-0.9
2,460,544	-		ABZR87_RS11605	0.72	+0.3
2,460,544	-		ABZR87_RS11605	0.72	+0.9
2,460,719	+		ABZR87_RS11605	0.84	+0.4
2,460,825	+				+0.3
2,460,825	+				+0.8
2,460,826	-				-0.6
2,460,826	-				-0.7
2,461,111	+				-0.5
2,461,111	+				+0.4
2,461,111	+				+0.9
2,461,112	-				-0.1
2,461,115	+				-0.3
2,461,115	+				+0.2
2,461,166	+				+0.1
2,461,288	+		ABZR87_RS11610	0.35	+0.1
2,461,288	+		ABZR87_RS11610	0.35	+0.0
2,461,288	+		ABZR87_RS11610	0.35	-0.4
2,461,288	+		ABZR87_RS11610	0.35	-0.1
2,461,288	+		ABZR87_RS11610	0.35	+0.1
2,461,288	+		ABZR87_RS11610	0.35	+0.2
2,461,288	+		ABZR87_RS11610	0.35	+0.4
2,461,289	-		ABZR87_RS11610	0.35	+0.5
2,461,289	-		ABZR87_RS11610	0.35	+1.7
2,461,289	-		ABZR87_RS11610	0.35	-0.3
2,461,289	-		ABZR87_RS11610	0.35	-0.2
2,461,441	+		ABZR87_RS11610	0.70	-0.3
2,461,442	-		ABZR87_RS11610	0.70	-1.9
2,461,448	-		ABZR87_RS11610	0.71	+0.5
2,461,465	+		ABZR87_RS11610	0.75	-0.9
2,461,465	+		ABZR87_RS11610	0.75	-0.8
2,461,465	+		ABZR87_RS11610	0.75	-1.1
2,461,466	-		ABZR87_RS11610	0.76	-0.3
2,461,619	-				+1.4
2,461,657	+				+0.2
2,461,657	+				+1.0
2,461,658	-				+1.1
2,461,658	-				-0.9
2,461,658	-				-2.8
2,461,658	-				+0.8
2,461,693	+				+0.4
2,461,694	-				+0.1
2,461,708	+				-0.7
2,461,708	+				-1.6
2,461,708	+				+1.1
2,461,708	+				+0.4
2,461,708	+				+0.0
2,461,709	-				-0.7
2,461,709	-				-1.0
2,461,709	-				-0.5
2,461,709	-				-1.0
2,461,709	-				-1.5
2,462,074	+		ABZR87_RS11615	0.45	-1.7
2,462,074	+		ABZR87_RS11615	0.45	-1.2
2,462,075	-		ABZR87_RS11615	0.45	-0.3
2,462,075	-		ABZR87_RS11615	0.45	-0.7
2,462,530	-				-1.1
2,462,530	-				-0.1