Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS10540

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
2,230,087	+				-0.7
2,230,088	-				+0.1
2,230,088	-				-1.5
2,230,096	+				+0.5
2,230,097	-				+0.5
2,230,132	+				-2.2
2,230,133	-				+0.3
2,230,394	+		ABZR87_RS10540	0.51	+0.8
2,230,395	-		ABZR87_RS10540	0.51	-0.0
2,230,395	-		ABZR87_RS10540	0.51	-0.0
2,230,457	+		ABZR87_RS10540	0.62	+1.2
2,230,457	+		ABZR87_RS10540	0.62	-0.1
2,230,458	-		ABZR87_RS10540	0.62	+0.4
2,230,458	-		ABZR87_RS10540	0.62	-0.2
2,230,458	-		ABZR87_RS10540	0.62	+0.4
2,230,571	+		ABZR87_RS10540	0.82	-0.9
2,230,571	+		ABZR87_RS10540	0.82	-0.1
2,230,572	-		ABZR87_RS10540	0.82	-1.1
2,230,608	-		ABZR87_RS10540	0.89	-0.7
2,230,662	-				-0.9
2,230,693	+				+0.5
2,230,693	+				+0.4
2,230,745	+				+2.3
2,230,746	-				+1.5
2,230,760	+				-0.2