Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS09895

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
2,099,713	+				-0.1
2,099,713	+				+1.1
2,100,010	-		ABZR87_RS09885	0.41	-1.5
2,100,033	+		ABZR87_RS09885	0.48	-0.9
2,100,033	+		ABZR87_RS09885	0.48	-0.5
2,100,034	-		ABZR87_RS09885	0.48	-1.1
2,100,045	+		ABZR87_RS09885	0.51	-0.4
2,100,046	-		ABZR87_RS09885	0.51	+1.4
2,100,069	+		ABZR87_RS09885	0.57	+0.2
2,100,069	+		ABZR87_RS09885	0.57	-0.1
2,100,069	+		ABZR87_RS09885	0.57	+0.0
2,100,069	+		ABZR87_RS09885	0.57	+0.1
2,100,069	+		ABZR87_RS09885	0.57	+0.0
2,100,070	-		ABZR87_RS09885	0.58	+0.1
2,100,070	-		ABZR87_RS09885	0.58	-0.0
2,100,070	-		ABZR87_RS09885	0.58	+0.0
2,100,093	+		ABZR87_RS09885	0.64	+0.1
2,100,093	+		ABZR87_RS09885	0.64	-0.1
2,100,178	-		ABZR87_RS09885	0.87	+0.4
2,100,180	+		ABZR87_RS09885	0.88	-1.4
2,100,180	+		ABZR87_RS09885	0.88	-0.1
2,100,235	+				-0.1
2,100,402	-		ABZR87_RS09890	0.42	-0.6
2,100,431	+		ABZR87_RS09890	0.49	-1.6
2,100,431	+		ABZR87_RS09890	0.49	-0.2
2,100,432	-		ABZR87_RS09890	0.49	-0.5
2,100,437	+		ABZR87_RS09890	0.50	-1.3
2,100,437	+		ABZR87_RS09890	0.50	-0.3
2,100,437	+		ABZR87_RS09890	0.50	-0.0
2,100,437	+		ABZR87_RS09890	0.50	+0.1
2,100,438	-		ABZR87_RS09890	0.51	-0.9
2,100,438	-		ABZR87_RS09890	0.51	-0.6
2,100,438	-		ABZR87_RS09890	0.51	-1.3
2,100,438	-		ABZR87_RS09890	0.51	+0.9
2,100,438	-		ABZR87_RS09890	0.51	-0.4
2,100,632	+				+1.0
2,100,632	+				+0.2
2,100,632	+				-0.5
2,100,633	-				-0.4
2,100,649	+				+0.4
2,100,735	+				+0.6
2,100,739	+				+1.3
2,100,740	-				-1.0
2,100,740	-				+0.7
2,100,859	+		ABZR87_RS09895	0.36	-1.6
2,100,860	-		ABZR87_RS09895	0.36	-1.7
2,100,965	-		ABZR87_RS09895	0.60	-1.0
2,101,150	+				-0.1
2,101,151	-				-0.0
2,101,151	-				+0.3
2,101,199	+				+0.1
2,101,199	+				+0.3
2,101,199	+				+0.9
2,101,366	+		ABZR87_RS09900	0.12	+0.1
2,101,366	+		ABZR87_RS09900	0.12	-0.1
2,101,366	+		ABZR87_RS09900	0.12	+0.8
2,101,367	-		ABZR87_RS09900	0.12	+0.2
2,101,372	+		ABZR87_RS09900	0.13	+0.0
2,101,545	+		ABZR87_RS09900	0.31	+0.5
2,101,558	+		ABZR87_RS09900	0.33	-0.4
2,101,558	+		ABZR87_RS09900	0.33	-1.3
2,101,558	+		ABZR87_RS09900	0.33	-0.2
2,101,558	+		ABZR87_RS09900	0.33	-0.6
2,101,559	-		ABZR87_RS09900	0.33	+0.9
2,101,559	-		ABZR87_RS09900	0.33	-0.3
2,101,591	+		ABZR87_RS09900	0.36	-0.1
2,101,591	+		ABZR87_RS09900	0.36	+0.4
2,101,591	+		ABZR87_RS09900	0.36	+1.2
2,101,591	+		ABZR87_RS09900	0.36	-0.4
2,101,591	+		ABZR87_RS09900	0.36	-0.2
2,101,592	-		ABZR87_RS09900	0.36	-2.7
2,101,592	-		ABZR87_RS09900	0.36	+0.2
2,101,597	+		ABZR87_RS09900	0.37	-1.7
2,101,771	+		ABZR87_RS09900	0.55	-0.9
2,101,771	+		ABZR87_RS09900	0.55	-0.8
2,101,772	-		ABZR87_RS09900	0.56	-0.9
2,101,780	+		ABZR87_RS09900	0.56	-0.1
2,101,780	+		ABZR87_RS09900	0.56	+0.3
2,101,780	+		ABZR87_RS09900	0.56	+0.2
2,101,780	+		ABZR87_RS09900	0.56	-0.2
2,101,780	+		ABZR87_RS09900	0.56	-0.6
2,101,780	+		ABZR87_RS09900	0.56	-0.1
2,101,781	-		ABZR87_RS09900	0.57	-0.6
2,101,803	+		ABZR87_RS09900	0.59	-0.3
2,101,865	-		ABZR87_RS09900	0.65	-0.0
2,101,865	-		ABZR87_RS09900	0.65	-0.8
2,101,865	-		ABZR87_RS09900	0.65	+0.5