Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS09830

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
2,087,871	+				-1.4
2,087,871	+				-0.3
2,087,871	+				-1.9
2,087,871	+				-0.4
2,087,872	-				+0.1
2,087,872	-				-0.8
2,087,872	-				-0.1
2,087,905	-				+0.7
2,088,041	+		ABZR87_RS09825	0.15	+0.6
2,088,041	+		ABZR87_RS09825	0.15	-0.9
2,088,041	+		ABZR87_RS09825	0.15	+0.7
2,088,042	-		ABZR87_RS09825	0.15	+0.4
2,088,084	+		ABZR87_RS09825	0.19	+0.7
2,088,085	-		ABZR87_RS09825	0.19	-0.2
2,088,122	+		ABZR87_RS09825	0.23	+0.2
2,088,122	+		ABZR87_RS09825	0.23	+0.3
2,088,123	-		ABZR87_RS09825	0.23	-1.9
2,088,126	+		ABZR87_RS09825	0.24	+0.4
2,088,126	+		ABZR87_RS09825	0.24	-0.4
2,088,126	+		ABZR87_RS09825	0.24	+0.1
2,088,127	-		ABZR87_RS09825	0.24	+0.9
2,088,127	-		ABZR87_RS09825	0.24	-1.0
2,088,127	-		ABZR87_RS09825	0.24	+1.4
2,088,127	-		ABZR87_RS09825	0.24	+0.1
2,088,127	-		ABZR87_RS09825	0.24	+0.8
2,088,127	-		ABZR87_RS09825	0.24	-0.6
2,088,127	-		ABZR87_RS09825	0.24	+0.1
2,088,127	-		ABZR87_RS09825	0.24	+0.3
2,088,127	-		ABZR87_RS09825	0.24	+0.8
2,089,199	-		ABZR87_RS09830	0.48	-0.9
2,089,199	-		ABZR87_RS09830	0.48	+0.5
2,089,252	+		ABZR87_RS09830	0.56	+0.3
2,089,252	+		ABZR87_RS09830	0.56	+0.2
2,089,252	+		ABZR87_RS09830	0.56	+0.2
2,089,252	+		ABZR87_RS09830	0.56	+0.7
2,089,252	+		ABZR87_RS09830	0.56	+0.6
2,089,253	-		ABZR87_RS09830	0.56	+1.1
2,089,253	-		ABZR87_RS09830	0.56	-0.5
2,089,253	-		ABZR87_RS09830	0.56	-1.0
2,089,253	-		ABZR87_RS09830	0.56	-0.5
2,089,253	-		ABZR87_RS09830	0.56	-0.7
2,089,253	-		ABZR87_RS09830	0.56	-0.6
2,089,253	-		ABZR87_RS09830	0.56	-0.6
2,089,253	-		ABZR87_RS09830	0.56	+0.2
2,089,253	-		ABZR87_RS09830	0.56	-0.3
2,089,253	-		ABZR87_RS09830	0.56	-0.8
2,089,380	+		ABZR87_RS09830	0.73	+0.1
2,089,464	+		ABZR87_RS09830	0.85	-0.1
2,089,464	+		ABZR87_RS09830	0.85	-0.6
2,089,536	+				+0.8
2,089,536	+				-0.7
2,089,634	+				-0.1
2,089,634	+				+0.4
2,089,634	+				+0.0
2,089,634	+				-0.4
2,089,635	-				-0.2
2,089,635	-				+0.4
2,089,635	-				+0.2
2,089,639	+				-0.3
2,089,645	+				-0.3
2,089,646	-				-0.9
2,089,646	-				-0.9
2,089,646	-				+0.3
2,089,670	-				+0.4
2,089,693	+				+0.7
2,089,693	+				+0.3
2,089,693	+				+0.1
2,089,694	-				+0.2
2,089,694	-				-0.5
2,089,936	+		ABZR87_RS09835	0.16	-0.1
2,089,936	+		ABZR87_RS09835	0.16	-0.8
2,089,936	+		ABZR87_RS09835	0.16	-0.4
2,089,937	-		ABZR87_RS09835	0.16	-0.5
2,089,961	-		ABZR87_RS09835	0.18	-0.4
2,089,961	-		ABZR87_RS09835	0.18	-0.4
2,089,961	-		ABZR87_RS09835	0.18	+0.1
2,089,990	+		ABZR87_RS09835	0.19	-0.6
2,089,990	+		ABZR87_RS09835	0.19	+0.9
2,089,990	+		ABZR87_RS09835	0.19	-0.8
2,089,991	-		ABZR87_RS09835	0.20	-1.5
2,089,991	-		ABZR87_RS09835	0.20	-0.0
2,089,991	-		ABZR87_RS09835	0.20	+1.0
2,089,991	-		ABZR87_RS09835	0.20	+0.6
2,090,452	+		ABZR87_RS09835	0.51	+0.5
2,090,453	-		ABZR87_RS09835	0.51	-0.9
2,090,542	-		ABZR87_RS09835	0.57	-2.1