Experiment: MoLS4 with Pantothenic with Casamino acids (vit. assay) 0.05%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt gap-1 and DVU0566 are separated by 19 nucleotides DVU0566 and DVU0567 are separated by 214 nucleotides DVU0567 and DVU0568 are separated by 121 nucleotides
DVU0565: gap-1 - glyceraldehyde 3-phosphate dehydrogenase (TIGR), at 630,087 to 631,103
gap-1
DVU0566: DVU0566 - GAF domain protein (TIGR), at 631,123 to 631,680
DVU0566
DVU0567: DVU0567 - TerC family protein (TIGR), at 631,895 to 632,974
DVU0567
DVU0568: DVU0568 - rhodanese-like domain protein (TIGR), at 633,096 to 634,136
DVU0568
Position (kb) 631
632
633 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 630.964 kb on + strand, within gap-1 at 630.972 kb on + strand, within gap-1 at 631.017 kb on - strand at 631.285 kb on + strand, within DVU0566 at 631.335 kb on + strand, within DVU0566 at 631.348 kb on - strand, within DVU0566 at 631.407 kb on + strand, within DVU0566 at 631.422 kb on - strand, within DVU0566 at 631.469 kb on - strand, within DVU0566 at 631.476 kb on - strand, within DVU0566 at 631.623 kb on - strand, within DVU0566 at 631.635 kb on - strand at 631.696 kb on + strand at 631.751 kb on - strand at 631.968 kb on + strand at 631.973 kb on + strand at 631.981 kb on - strand at 632.105 kb on - strand, within DVU0567 at 632.110 kb on - strand, within DVU0567 at 632.190 kb on + strand, within DVU0567 at 632.255 kb on + strand, within DVU0567 at 632.255 kb on + strand, within DVU0567 at 632.263 kb on - strand, within DVU0567 at 632.295 kb on - strand, within DVU0567 at 632.382 kb on - strand, within DVU0567 at 632.393 kb on + strand, within DVU0567 at 632.406 kb on + strand, within DVU0567 at 632.453 kb on + strand, within DVU0567 at 632.634 kb on + strand, within DVU0567 at 632.642 kb on - strand, within DVU0567 at 632.642 kb on - strand, within DVU0567 at 632.694 kb on + strand, within DVU0567 at 632.765 kb on + strand, within DVU0567 at 632.776 kb on + strand, within DVU0567 at 632.791 kb on + strand, within DVU0567 at 632.902 kb on + strand at 633.062 kb on - strand at 633.085 kb on - strand at 633.093 kb on - strand at 633.119 kb on - strand at 633.210 kb on + strand, within DVU0568 at 633.251 kb on - strand, within DVU0568 at 633.326 kb on + strand, within DVU0568 at 633.326 kb on + strand, within DVU0568 at 633.334 kb on - strand, within DVU0568 at 633.462 kb on - strand, within DVU0568 at 633.482 kb on - strand, within DVU0568 at 633.510 kb on - strand, within DVU0568 at 633.510 kb on - strand, within DVU0568 at 633.530 kb on + strand, within DVU0568 at 633.535 kb on + strand, within DVU0568 at 633.538 kb on - strand, within DVU0568 at 633.543 kb on - strand, within DVU0568 at 633.548 kb on - strand, within DVU0568 at 633.584 kb on + strand, within DVU0568 at 633.697 kb on + strand, within DVU0568 at 633.762 kb on - strand, within DVU0568 at 633.772 kb on + strand, within DVU0568 at 633.780 kb on - strand, within DVU0568 at 633.790 kb on + strand, within DVU0568 at 633.798 kb on - strand, within DVU0568 at 633.858 kb on - strand, within DVU0568 at 633.863 kb on - strand, within DVU0568 at 633.863 kb on - strand, within DVU0568 at 633.907 kb on + strand, within DVU0568 at 633.907 kb on + strand, within DVU0568 at 633.915 kb on - strand, within DVU0568 at 633.919 kb on + strand, within DVU0568 at 633.935 kb on + strand, within DVU0568
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Pantothenic with Casamino acids (vit. assay) 0.05% remove 630,964 + gap-1 DVU0565 0.86 +0.4 630,972 + gap-1 DVU0565 0.87 +0.0 631,017 - +0.5 631,285 + DVU0566 0.29 +1.2 631,335 + DVU0566 0.38 +1.2 631,348 - DVU0566 0.40 -0.2 631,407 + DVU0566 0.51 -0.9 631,422 - DVU0566 0.54 +0.5 631,469 - DVU0566 0.62 -1.2 631,476 - DVU0566 0.63 -0.1 631,623 - DVU0566 0.90 -0.1 631,635 - -0.4 631,696 + -0.5 631,751 - -0.2 631,968 + -0.7 631,973 + -0.4 631,981 - -0.4 632,105 - DVU0567 0.19 +2.4 632,110 - DVU0567 0.20 -0.3 632,190 + DVU0567 0.27 +1.5 632,255 + DVU0567 0.33 -0.3 632,255 + DVU0567 0.33 -0.2 632,263 - DVU0567 0.34 +2.8 632,295 - DVU0567 0.37 -0.4 632,382 - DVU0567 0.45 +1.3 632,393 + DVU0567 0.46 +1.3 632,406 + DVU0567 0.47 +0.0 632,453 + DVU0567 0.52 -0.6 632,634 + DVU0567 0.68 +0.6 632,642 - DVU0567 0.69 +0.0 632,642 - DVU0567 0.69 -0.2 632,694 + DVU0567 0.74 +0.5 632,765 + DVU0567 0.81 +1.2 632,776 + DVU0567 0.82 -1.6 632,791 + DVU0567 0.83 -1.3 632,902 + -0.5 633,062 - -0.6 633,085 - +1.8 633,093 - -0.1 633,119 - +0.0 633,210 + DVU0568 0.11 -1.5 633,251 - DVU0568 0.15 -1.1 633,326 + DVU0568 0.22 -2.3 633,326 + DVU0568 0.22 -1.4 633,334 - DVU0568 0.23 +1.1 633,462 - DVU0568 0.35 -0.5 633,482 - DVU0568 0.37 -0.7 633,510 - DVU0568 0.40 -0.1 633,510 - DVU0568 0.40 +0.6 633,530 + DVU0568 0.42 +2.8 633,535 + DVU0568 0.42 -1.5 633,538 - DVU0568 0.42 +0.1 633,543 - DVU0568 0.43 -0.1 633,548 - DVU0568 0.43 -0.1 633,584 + DVU0568 0.47 +0.2 633,697 + DVU0568 0.58 -0.6 633,762 - DVU0568 0.64 -0.4 633,772 + DVU0568 0.65 +1.8 633,780 - DVU0568 0.66 -0.5 633,790 + DVU0568 0.67 -0.2 633,798 - DVU0568 0.67 +1.0 633,858 - DVU0568 0.73 -0.8 633,863 - DVU0568 0.74 -0.5 633,863 - DVU0568 0.74 -1.4 633,907 + DVU0568 0.78 -0.3 633,907 + DVU0568 0.78 -0.3 633,915 - DVU0568 0.79 -0.1 633,919 + DVU0568 0.79 +0.4 633,935 + DVU0568 0.81 -0.9
Or see this region's nucleotide sequence