Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1538
Experiment: MoLS4 with Pantothenic with Casamino acids (vit. assay) 0.05%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoLS4 with Pantothenic with Casamino acids (vit. assay) 0.05% |
---|---|---|---|---|---|
remove | |||||
1,604,347 | - | +0.6 | |||
1,604,361 | + | -0.4 | |||
1,604,374 | - | -0.1 | |||
1,604,488 | + | DVU1537 | 0.23 | -0.7 | |
1,604,607 | + | DVU1537 | 0.44 | +0.1 | |
1,604,660 | - | DVU1537 | 0.53 | +1.2 | |
1,604,684 | - | DVU1537 | 0.57 | -0.6 | |
1,604,690 | - | DVU1537 | 0.58 | -0.2 | |
1,604,750 | + | DVU1537 | 0.69 | -0.1 | |
1,604,813 | + | DVU1537 | 0.80 | +1.2 | |
1,604,912 | + | -1.4 | |||
1,605,008 | + | +0.3 | |||
1,605,008 | + | +0.8 | |||
1,605,016 | - | -0.3 | |||
1,605,016 | - | +0.5 | |||
1,605,131 | - | -0.6 | |||
1,605,226 | + | +0.8 | |||
1,605,230 | + | +0.1 | |||
1,605,297 | - | DVU1538 | 0.21 | +0.2 | |
1,605,299 | - | DVU1538 | 0.21 | +0.9 | |
1,605,336 | + | DVU1538 | 0.28 | -0.6 | |
1,605,406 | - | DVU1538 | 0.41 | -0.2 | |
1,605,515 | - | DVU1538 | 0.62 | +0.0 | |
1,605,877 | - | -0.1 | |||
1,605,877 | - | -0.7 |
Or see this region's nucleotide sequence