Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS23240

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
1,576,032	-		ABZR87_RS23235	0.42	+0.4
1,576,041	+		ABZR87_RS23235	0.42	-0.0
1,576,042	-		ABZR87_RS23235	0.43	-0.3
1,576,071	-		ABZR87_RS23235	0.45	-0.1
1,576,071	-		ABZR87_RS23235	0.45	+1.3
1,576,071	-		ABZR87_RS23235	0.45	-0.4
1,576,194	+		ABZR87_RS23235	0.57	-0.3
1,576,194	+		ABZR87_RS23235	0.57	-0.2
1,576,195	-		ABZR87_RS23235	0.57	-0.5
1,576,195	-		ABZR87_RS23235	0.57	-0.3
1,576,326	+		ABZR87_RS23235	0.70	-0.7
1,576,353	+		ABZR87_RS23235	0.72	-0.6
1,576,353	+		ABZR87_RS23235	0.72	-1.4
1,576,404	+		ABZR87_RS23235	0.77	-0.2
1,576,404	+		ABZR87_RS23235	0.77	-0.4
1,576,404	+		ABZR87_RS23235	0.77	+0.6
1,576,405	-		ABZR87_RS23235	0.77	+0.8
1,576,405	-		ABZR87_RS23235	0.77	-0.7
1,576,405	-		ABZR87_RS23235	0.77	-1.1
1,576,405	-		ABZR87_RS23235	0.77	-0.4
1,576,489	-		ABZR87_RS23235	0.85	-0.6
1,576,755	-				+0.3
1,576,971	-		ABZR87_RS23240	0.24	+0.9
1,576,971	-		ABZR87_RS23240	0.24	+0.5
1,576,971	-		ABZR87_RS23240	0.24	-0.7
1,577,099	+		ABZR87_RS23240	0.39	-0.2
1,577,099	+		ABZR87_RS23240	0.39	-0.7
1,577,099	+		ABZR87_RS23240	0.39	+0.1
1,577,100	-		ABZR87_RS23240	0.39	+1.5
1,577,100	-		ABZR87_RS23240	0.39	-0.0
1,577,141	+		ABZR87_RS23240	0.43	+0.6
1,577,153	+		ABZR87_RS23240	0.45	-1.4
1,577,153	+		ABZR87_RS23240	0.45	-0.1
1,577,153	+		ABZR87_RS23240	0.45	-1.1
1,577,153	+		ABZR87_RS23240	0.45	-0.1
1,577,153	+		ABZR87_RS23240	0.45	-0.3
1,577,153	+		ABZR87_RS23240	0.45	+0.4
1,577,154	-		ABZR87_RS23240	0.45	-1.8
1,577,154	-		ABZR87_RS23240	0.45	-1.0
1,577,162	+		ABZR87_RS23240	0.46	+0.3
1,577,163	-		ABZR87_RS23240	0.46	-0.2
1,577,163	-		ABZR87_RS23240	0.46	-0.1
1,577,249	+		ABZR87_RS23240	0.55	-1.2
1,577,249	+		ABZR87_RS23240	0.55	+0.0
1,577,250	-		ABZR87_RS23240	0.56	-0.3
1,577,250	-		ABZR87_RS23240	0.56	-0.6
1,577,250	-		ABZR87_RS23240	0.56	-0.4
1,577,250	-		ABZR87_RS23240	0.56	-0.9
1,577,314	+		ABZR87_RS23240	0.63	-0.0
1,577,314	+		ABZR87_RS23240	0.63	-1.3
1,577,314	+		ABZR87_RS23240	0.63	-1.8
1,577,314	+		ABZR87_RS23240	0.63	-0.5
1,577,314	+		ABZR87_RS23240	0.63	-0.2
1,577,315	-		ABZR87_RS23240	0.63	-1.0
1,577,399	+		ABZR87_RS23240	0.72	-1.9
1,577,400	-		ABZR87_RS23240	0.72	+1.9
1,577,400	-		ABZR87_RS23240	0.72	+1.9
1,577,400	-		ABZR87_RS23240	0.72	-0.2
1,577,400	-		ABZR87_RS23240	0.72	+0.3
1,577,402	+		ABZR87_RS23240	0.73	-0.2
1,577,402	+		ABZR87_RS23240	0.73	-0.0
1,577,403	-		ABZR87_RS23240	0.73	-0.8
1,577,403	-		ABZR87_RS23240	0.73	-0.1
1,577,417	+		ABZR87_RS23240	0.74	+1.9
1,577,417	+		ABZR87_RS23240	0.74	+1.1
1,577,417	+		ABZR87_RS23240	0.74	-0.4
1,577,417	+		ABZR87_RS23240	0.74	-1.1
1,577,417	+		ABZR87_RS23240	0.74	-0.3
1,577,417	+		ABZR87_RS23240	0.74	-0.7
1,577,417	+		ABZR87_RS23240	0.74	-0.5
1,577,417	+		ABZR87_RS23240	0.74	+0.5
1,577,418	-		ABZR87_RS23240	0.74	-1.2
1,577,418	-		ABZR87_RS23240	0.74	+0.6
1,577,418	-		ABZR87_RS23240	0.74	-0.1
1,577,418	-		ABZR87_RS23240	0.74	-0.2
1,577,418	-		ABZR87_RS23240	0.74	-0.5
1,577,418	-		ABZR87_RS23240	0.74	-0.5
1,577,418	-		ABZR87_RS23240	0.74	-0.4
1,577,543	+		ABZR87_RS23240	0.88	-0.9
1,577,633	+				-0.0
1,577,633	+				+0.9
1,577,633	+				+1.2
1,577,633	+				-0.3
1,577,634	-				+0.9
1,577,634	-				-0.7
1,577,680	+				-0.1
1,577,680	+				-1.4
1,577,681	-				-1.0
1,577,681	-				+0.6
1,577,681	-				+0.3
1,577,683	+				+0.6
1,577,684	-				+0.3
1,577,702	+				+0.3
1,577,702	+				-0.3
1,577,702	+				+0.3
1,577,702	+				+0.2
1,577,704	+				-0.4
1,577,704	+				-0.3
1,577,704	+				+0.5
1,577,704	+				+1.3
1,577,704	+				-0.3
1,577,730	+				-0.4
1,577,731	-				+0.6
1,577,731	-				+0.7
1,577,760	+				+0.3
1,577,760	+				+0.3
1,577,760	+				+0.5
1,577,760	+				+0.0
1,577,760	+				+0.5
1,577,761	-				+0.3
1,577,761	-				+0.4
1,577,785	+				+0.6
1,577,786	-				+0.5
1,577,786	-				-0.6
1,577,965	+				+0.9
1,578,203	+				+3.5
1,578,203	+				-0.4
1,578,203	+				+0.1
1,578,204	-				+0.1
1,578,204	-				+0.1
1,578,279	+				-0.2
1,578,280	-				-0.4
1,578,280	-				+0.0
1,578,280	-				-0.4
1,578,282	-				+0.4
1,578,305	+				-0.0
1,578,306	-				-0.5
1,578,400	+				+0.6
1,578,400	+				-0.3
1,578,400	+				-0.3
1,578,400	+				-0.6
1,578,400	+				-0.0
1,578,401	-				-0.5
1,578,401	-				-0.5
1,578,401	-				+0.5
1,578,480	+				+1.0
1,578,480	+				-0.7
1,578,480	+				-0.4
1,578,480	+				-0.4
1,578,480	+				+0.1
1,578,480	+				-0.1
1,578,480	+				-1.3
1,578,481	-				+0.8
1,578,481	-				+0.6
1,578,481	-				-0.2
1,578,481	-				-0.1
1,578,521	-				-0.3
1,578,521	-				+0.3