Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS22890

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
1,494,156	+		ABZR87_RS22885	0.71	-1.0
1,494,157	-		ABZR87_RS22885	0.71	+0.1
1,494,157	-		ABZR87_RS22885	0.71	-0.0
1,494,157	-		ABZR87_RS22885	0.71	-0.1
1,494,157	-		ABZR87_RS22885	0.71	+0.2
1,494,157	-		ABZR87_RS22885	0.71	+0.0
1,494,157	-		ABZR87_RS22885	0.71	-1.0
1,494,201	+		ABZR87_RS22885	0.74	+0.7
1,494,201	+		ABZR87_RS22885	0.74	-0.3
1,494,201	+		ABZR87_RS22885	0.74	-0.8
1,494,201	+		ABZR87_RS22885	0.74	-0.1
1,494,201	+		ABZR87_RS22885	0.74	+0.1
1,494,201	+		ABZR87_RS22885	0.74	+1.1
1,494,201	+		ABZR87_RS22885	0.74	+0.3
1,494,201	+		ABZR87_RS22885	0.74	-0.7
1,494,201	+		ABZR87_RS22885	0.74	-0.6
1,494,202	-		ABZR87_RS22885	0.74	+0.6
1,494,202	-		ABZR87_RS22885	0.74	-0.2
1,494,202	-		ABZR87_RS22885	0.74	+0.2
1,494,202	-		ABZR87_RS22885	0.74	+0.4
1,494,202	-		ABZR87_RS22885	0.74	+1.9
1,494,227	-		ABZR87_RS22885	0.76	+0.6
1,494,288	+		ABZR87_RS22885	0.81	+0.1
1,494,288	+		ABZR87_RS22885	0.81	+0.6
1,494,288	+		ABZR87_RS22885	0.81	-0.2
1,494,288	+		ABZR87_RS22885	0.81	+0.1
1,494,289	-		ABZR87_RS22885	0.81	-0.6
1,494,289	-		ABZR87_RS22885	0.81	-0.1
1,494,456	+				-0.1
1,494,457	-				+0.5
1,494,524	-				-0.1
1,494,524	-				-0.7
1,494,544	-				+1.5
1,494,606	+				-0.1
1,494,606	+				-0.9
1,494,606	+				+0.3
1,494,607	-				-0.9
1,494,669	+		ABZR87_RS22890	0.17	-0.8
1,494,669	+		ABZR87_RS22890	0.17	-1.0
1,494,669	+		ABZR87_RS22890	0.17	-0.1
1,494,669	+		ABZR87_RS22890	0.17	-0.4
1,494,669	+		ABZR87_RS22890	0.17	-1.7
1,494,670	-		ABZR87_RS22890	0.17	-1.3
1,494,711	+		ABZR87_RS22890	0.23	-0.0
1,494,712	-		ABZR87_RS22890	0.23	-2.8
1,494,954	+		ABZR87_RS22890	0.55	+0.5
1,494,954	+		ABZR87_RS22890	0.55	-0.7
1,494,955	-		ABZR87_RS22890	0.56	-0.2
1,494,955	-		ABZR87_RS22890	0.56	-1.2
1,494,955	-		ABZR87_RS22890	0.56	-0.6
1,494,955	-		ABZR87_RS22890	0.56	-0.9
1,495,269	-				-1.1
1,495,277	+				-0.8
1,495,300	-				-0.4
1,495,320	+				+0.2
1,495,320	+				+0.9
1,495,321	-				-1.0
1,495,321	-				+0.1
1,495,321	-				+0.5
1,495,321	-				+0.6
1,495,321	-				+0.7
1,495,321	-				-0.1
1,495,473	-				+0.1
1,495,478	+				-0.1
1,495,478	+				-0.0
1,495,479	-				+0.4
1,495,479	-				-0.5
1,495,487	+				-0.2
1,495,514	+				+1.3
1,495,514	+				-0.5
1,495,514	+				-0.8
1,495,550	+				-2.7
1,495,665	-		ABZR87_RS22895	0.17	-1.3
1,495,665	-		ABZR87_RS22895	0.17	+0.9
1,495,670	+		ABZR87_RS22895	0.17	-0.4
1,495,670	+		ABZR87_RS22895	0.17	-0.2
1,495,670	+		ABZR87_RS22895	0.17	-0.3
1,495,671	-		ABZR87_RS22895	0.17	+0.3
1,495,671	-		ABZR87_RS22895	0.17	+0.5
1,495,671	-		ABZR87_RS22895	0.17	+0.1
1,495,671	-		ABZR87_RS22895	0.17	-0.2
1,495,671	-		ABZR87_RS22895	0.17	-0.8
1,495,671	-		ABZR87_RS22895	0.17	-0.9
1,495,671	-		ABZR87_RS22895	0.17	+1.3
1,495,676	+		ABZR87_RS22895	0.17	+0.7
1,495,676	+		ABZR87_RS22895	0.17	+0.8
1,495,676	+		ABZR87_RS22895	0.17	-1.2
1,495,677	-		ABZR87_RS22895	0.17	-0.6
1,495,677	-		ABZR87_RS22895	0.17	+0.4
1,495,677	-		ABZR87_RS22895	0.17	-0.5
1,495,677	-		ABZR87_RS22895	0.17	-0.3
1,495,856	+		ABZR87_RS22895	0.28	+2.9
1,495,916	+		ABZR87_RS22895	0.31	-0.8
1,495,916	+		ABZR87_RS22895	0.31	+0.9
1,495,916	+		ABZR87_RS22895	0.31	+0.6
1,495,917	-		ABZR87_RS22895	0.31	+1.6
1,495,917	-		ABZR87_RS22895	0.31	-1.2
1,495,917	-		ABZR87_RS22895	0.31	+0.3
1,495,917	-		ABZR87_RS22895	0.31	+0.9
1,495,917	-		ABZR87_RS22895	0.31	-0.9
1,495,956	-		ABZR87_RS22895	0.34	+1.2
1,496,171	+		ABZR87_RS22895	0.46	-0.7
1,496,171	+		ABZR87_RS22895	0.46	-1.0
1,496,171	+		ABZR87_RS22895	0.46	-0.5
1,496,171	+		ABZR87_RS22895	0.46	-0.3
1,496,171	+		ABZR87_RS22895	0.46	-0.2
1,496,171	+		ABZR87_RS22895	0.46	+1.0
1,496,172	-		ABZR87_RS22895	0.46	-0.7
1,496,172	-		ABZR87_RS22895	0.46	+0.4
1,496,264	+		ABZR87_RS22895	0.52	+0.4
1,496,264	+		ABZR87_RS22895	0.52	+1.1