Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS22340

Experiment: Acanthamoeba sp., muxed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-1
1,370,000	+		ABZR87_RS22335	0.68	+0.9
1,370,000	+		ABZR87_RS22335	0.68	+0.3
1,370,000	+		ABZR87_RS22335	0.68	-1.4
1,370,000	+		ABZR87_RS22335	0.68	-0.3
1,370,000	+		ABZR87_RS22335	0.68	+0.2
1,370,001	-		ABZR87_RS22335	0.68	-0.7
1,370,001	-		ABZR87_RS22335	0.68	+0.5
1,370,001	-		ABZR87_RS22335	0.68	+0.3
1,370,133	-		ABZR87_RS22335	0.73	+1.0
1,370,133	-		ABZR87_RS22335	0.73	-0.0
1,370,133	-		ABZR87_RS22335	0.73	-0.8
1,370,133	-		ABZR87_RS22335	0.73	-0.1
1,370,133	-		ABZR87_RS22335	0.73	+0.3
1,370,144	+		ABZR87_RS22335	0.74	+0.2
1,370,144	+		ABZR87_RS22335	0.74	-1.7
1,370,145	-		ABZR87_RS22335	0.74	+0.3
1,370,145	-		ABZR87_RS22335	0.74	-2.2
1,370,145	-		ABZR87_RS22335	0.74	-0.8
1,370,169	+		ABZR87_RS22335	0.75	-0.9
1,370,169	+		ABZR87_RS22335	0.75	-0.1
1,370,170	-		ABZR87_RS22335	0.75	-0.3
1,370,218	-		ABZR87_RS22335	0.76	-0.5
1,370,259	-		ABZR87_RS22335	0.78	-0.6
1,370,573	+		ABZR87_RS22335	0.90	+0.0
1,370,574	-		ABZR87_RS22335	0.90	+1.1
1,370,574	-		ABZR87_RS22335	0.90	+0.3
1,370,849	+				-0.1
1,370,850	-				-1.4
1,370,933	+				+0.1
1,370,933	+				-0.4
1,370,934	-				-0.4
1,370,934	-				+0.1
1,371,037	+		ABZR87_RS22340	0.57	-1.4
1,371,058	+		ABZR87_RS22340	0.67	-0.2
1,371,213	-				-0.4
1,371,213	-				+0.2
1,371,213	-				+0.3
1,371,326	+				-0.3
1,371,326	+				+1.1
1,371,326	+				-0.5
1,371,327	-				-0.5
1,371,327	-				+0.4
1,371,327	-				-0.5
1,371,327	-				-1.6
1,371,327	-				-0.2
1,371,327	-				-0.8
1,371,327	-				-1.1
1,371,463	+				-0.5
1,371,463	+				-0.2
1,371,464	-				+1.0
1,371,464	-				+1.2
1,371,464	-				+0.5
1,371,464	-				-0.0
1,371,485	+				-0.0
1,371,595	+				+0.8
1,371,595	+				+0.2
1,371,595	+				+0.2
1,371,595	+				+0.1
1,371,595	+				+0.7
1,371,595	+				+0.7
1,371,596	-				-0.3
1,371,596	-				-0.6
1,371,596	-				+1.1
1,371,596	-				+0.2
1,371,619	-				+3.0
1,371,711	-				-0.9